RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 ZNF341Q9BYN7 854 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 SENP2Q9HC62 589 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 FZD1Q9UP38 647 aa16.85■□□□□ 0.29
TTC39A-216ENST00000530004 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
TTC39A-216ENST00000530004 ERICH2A1L162 156 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 ORC4O43929 436 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
TTC39A-216ENST00000530004 JAK2O60674 1132 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 RASA1P20936 1047 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 SYT1P21579 422 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 PRKG1Q13976 671 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 NFXL1Q6ZNB6 911 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 SGMS1Q86VZ5 419 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 LLPHQ9BRT6 129 aaKnown RBP16.84■□□□□ 0.29
TTC39A-216ENST00000530004 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 PASKQ96RG2 1323 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 STX6O43752 255 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
TTC39A-216ENST00000530004 MCM4P33991 863 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 WTAPQ15007 396 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 NSUN7Q8NE18 718 aaKnown RBP16.84■□□□□ 0.29
TTC39A-216ENST00000530004 CHMP4CQ96CF2 233 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 KLRG1Q96E93 195 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 ZNF112Q9UJU3 913 aa16.84■□□□□ 0.29
TTC39A-216ENST00000530004 CCDC69A6NI79 296 aa16.83■□□□□ 0.28
TTC39A-216ENST00000530004 CELF2O95319 508 aaKnown RBP16.83■□□□□ 0.28
TTC39A-216ENST00000530004 CTDNEP1O95476 244 aa16.83■□□□□ 0.28
TTC39A-216ENST00000530004 RRP1BQ14684 758 aaKnown RBP16.83■□□□□ 0.28
TTC39A-216ENST00000530004 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
TTC39A-216ENST00000530004 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
TTC39A-216ENST00000530004 ZNF444Q8N0Y2 327 aaPredicted RBP16.83■□□□□ 0.28
TTC39A-216ENST00000530004 SMARCC2Q8TAQ2 1214 aa16.83■□□□□ 0.28
TTC39A-216ENST00000530004 TNKSO95271 1327 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 FSTL1Q12841 308 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 IQCA1Q86XH1 822 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 WRNIP1Q96S55 665 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 ZBTB43O43298 467 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 BAG4O95429 457 aaKnown RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 CAP2P40123 477 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 IREB2P48200 963 aaKnown RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 NT5C2P49902 561 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 CST9Q5W186 159 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 LARP1BQ659C4 914 aaKnown RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 MICU3Q86XE3 530 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 ZSCAN10Q96SZ4 725 aaPredicted RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 GBA2Q9HCG7 927 aaPredicted RBP16.82■□□□□ 0.28
TTC39A-216ENST00000530004 SLC12A7Q9Y666 1083 aa16.82■□□□□ 0.28
TTC39A-216ENST00000530004 CTNND1O60716 968 aaKnown RBP16.81■□□□□ 0.28
TTC39A-216ENST00000530004 GDF11O95390 407 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
TTC39A-216ENST00000530004 AKR1B1P15121 316 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 PDCP20941 246 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 INPP5BP32019 993 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 FKBP1BP68106 108 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
TTC39A-216ENST00000530004 SEC23AQ15436 765 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 FAM47AQ5JRC9 791 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 TMTC2Q8N394 836 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
TTC39A-216ENST00000530004 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 RXRAP19793 462 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 JAG1P78504 1218 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 TFAP4Q01664 338 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 ABCB5Q2M3G0 1257 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 SHROOM1Q2M3G4 852 aaPredicted RBP16.8■□□□□ 0.28
TTC39A-216ENST00000530004 SYNE3Q6ZMZ3 975 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
TTC39A-216ENST00000530004 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
TTC39A-216ENST00000530004 VPS37CA5D8V6 355 aaPredicted RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 GOLGA8AA7E2F4 631 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 CPLX1O14810 134 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 TSPY3P0CV98 308 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 TSPY8P0CW00 308 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 ZKSCAN4Q969J2 545 aaPredicted RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 MTMR6Q9Y217 621 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 DDX11L8A8MPP1 907 aa16.79■□□□□ 0.28
TTC39A-216ENST00000530004 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
TTC39A-216ENST00000530004 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms