RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 GUCY1A2P33402 732 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 NLRC4Q9NPP4 1024 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 BAZ2BQ9UIF8 2168 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 ZC3H13Q5T200 1668 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 ANKRD65E5RJM6 399 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 LDHBP07195 334 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 CHRNDQ07001 517 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 FAM182BQ5T319 152 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 ARMCX5Q6P1M9 558 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 ALS2CR12Q96Q35 445 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 TMEM94Q12767 1356 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 POTEB2H3BUK9 544 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 RBL2Q08999 1139 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 USP49Q70CQ1 688 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 SLC35F6Q8N357 371 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
CCDC90B-214ENST00000529689 NRKQ7Z2Y5 1582 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 MAP3K15Q6ZN16 1313 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 CALM1P0DP23 149 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 CALM2P0DP24 149 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 CALM3P0DP25 149 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 MTF1Q14872 753 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 UBE3CQ15386 1083 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 TGFBRAP1Q8WUH2 860 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 NEDD4P46934 1319 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 TRAF5O00463 557 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 TACC1O75410 805 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 TUBB4AP04350 444 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 LDHCP07864 332 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 CDR1P51861 262 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 SHC4Q6S5L8 630 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 HDXQ7Z353 690 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 GNPATO15228 680 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
CCDC90B-214ENST00000529689 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 CDC25BP30305 580 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 KRT83P78385 493 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 NELFCDQ8IXH7 590 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 ATRIPQ8WXE1 791 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 FUCA2Q9BTY2 467 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 TEX33O43247 280 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 CIAO1O76071 339 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 IFFO1Q0D2I5 559 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 FAM114A1Q8IWE2 563 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 ZNF622Q969S3 477 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 MORC3Q14149 939 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 PLS1Q14651 629 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 KRT79Q5XKE5 535 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 PARD6BQ9BYG5 372 aa11.13□□□□□ -0.63
CCDC90B-214ENST00000529689 NMT2O60551 498 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 MMP1P03956 469 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 RFX5P48382 616 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 GNAQP50148 359 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 SARM1Q6SZW1 724 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 TMTC1Q8IUR5 882 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 JAKMIP2Q96AA8 810 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 BIN2Q9UBW5 565 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 IFNAR1P17181 557 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 RDXP35241 583 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 TECP42680 631 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 GRIN1Q05586 938 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms