RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TNNI2P48788 182 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 ZNF394Q53GI3 561 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 WFDC3Q8IUB2 231 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 CYB5D2Q8WUJ1 264 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 RNF34Q969K3 372 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 LRRC3Q9BY71 257 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 PCDHB14Q9Y5E9 798 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 ROBO2Q9HCK4 1378 aa7.44□□□□□ -1.22
C11orf88-204ENST00000529661 CHURC1-FNTBB4DL54 471 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
C11orf88-204ENST00000529661 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
C11orf88-204ENST00000529661 TCF3P15923 654 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 MCM4P33991 863 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 CLCN7P51798 805 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 IKZF1Q13422 519 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 MLECQ14165 292 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 DNAJB8Q8NHS0 232 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 ASB11Q8WXH4 323 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 CAPN6Q9Y6Q1 641 aa7.43□□□□□ -1.22
C11orf88-204ENST00000529661 H3BS24 57 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 DNAJA2O60884 412 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 ANGEL2Q5VTE6 544 aaKnown RBP7.42□□□□□ -1.22
C11orf88-204ENST00000529661 GK5Q6ZS86 529 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 SLFN12Q8IYM2 578 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
C11orf88-204ENST00000529661 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 PPP1R13LQ8WUF5 828 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 NKD1Q969G9 470 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
C11orf88-204ENST00000529661 COX4I2Q96KJ9 171 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 NT5C1AQ9BXI3 368 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 PITPNM2Q9BZ72 1349 aa7.41□□□□□ -1.22
C11orf88-204ENST00000529661 TAL1P17542 331 aaPredicted RBP7.4□□□□□ -1.22
C11orf88-204ENST00000529661 FUT4P22083 530 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 KIR3DL1P43629 444 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 TNK2Q07912 1038 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 ARSHQ5FYA8 562 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 BAHD1Q8TBE0 780 aaPredicted RBP7.4□□□□□ -1.22
C11orf88-204ENST00000529661 KIF2CQ99661 725 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 ATP13A1Q9HD20 1204 aa7.4□□□□□ -1.22
C11orf88-204ENST00000529661 ATE1O95260 518 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 RAG1P15918 1043 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 GBP1P32455 592 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 ZNF165P49910 485 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 CLCQ05315 142 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 ZNF792Q3KQV3 632 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 CCDC74BQ96LY2 380 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 GMIPQ9P107 970 aa7.39□□□□□ -1.23
C11orf88-204ENST00000529661 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 RACK1P63244 317 aaKnown RBP7.38□□□□□ -1.23
C11orf88-204ENST00000529661 ZP2Q05996 745 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 SEMA3GQ9NS98 782 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 DDX41Q9UJV9 622 aaKnown RBP7.38□□□□□ -1.23
C11orf88-204ENST00000529661 ADAMTS6Q9UKP5 1117 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 ST14Q9Y5Y6 855 aa7.38□□□□□ -1.23
C11orf88-204ENST00000529661 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 NT5DC4Q86YG4 428 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 SLITRK4Q8IW52 837 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
C11orf88-204ENST00000529661 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 UBE2FQ969M7 185 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 Q96M66 194 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
C11orf88-204ENST00000529661 RC3H2Q9HBD1 1191 aaKnown RBP7.37□□□□□ -1.23
C11orf88-204ENST00000529661 MBNL3Q9NUK0 354 aaKnown RBP7.37□□□□□ -1.23
C11orf88-204ENST00000529661 LRRN2O75325 713 aa7.36□□□□□ -1.23
C11orf88-204ENST00000529661 RNASE1P07998 156 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 METTL16Q86W50 562 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 ZNF654Q8IZM8 581 aa7.36□□□□□ -1.23
C11orf88-204ENST00000529661 PIWIL2Q8TC59 973 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 KREMEN1Q96MU8 473 aa7.36□□□□□ -1.23
C11orf88-204ENST00000529661 ANTXR1Q9H6X2 564 aa7.36□□□□□ -1.23
C11orf88-204ENST00000529661 CARS2Q9HA77 564 aaKnown RBP7.36□□□□□ -1.23
C11orf88-204ENST00000529661 KCNH3Q9ULD8 1083 aa7.36□□□□□ -1.23
C11orf88-204ENST00000529661 RGS13O14921 159 aa7.35□□□□□ -1.23
C11orf88-204ENST00000529661 SLC23A3Q6PIS1 610 aa7.35□□□□□ -1.23
C11orf88-204ENST00000529661 THAP5Q7Z6K1 395 aa7.35□□□□□ -1.23
C11orf88-204ENST00000529661 DTWD2Q8NBA8 298 aa7.35□□□□□ -1.23
C11orf88-204ENST00000529661 ATG4CQ96DT6 458 aa7.35□□□□□ -1.23
C11orf88-204ENST00000529661 UBOX5O94941 541 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
C11orf88-204ENST00000529661 FBXW10Q5XX13 1052 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 NLRC3Q7RTR2 1065 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms