RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
CHD7-209ENST00000529472 HSPA4P34932 840 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 RALYLQ86SE5 291 aaKnown RBP13.48□□□□□ -0.25
CHD7-209ENST00000529472 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 FEZ1Q99689 392 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 AFG3L2Q9Y4W6 797 aa13.48□□□□□ -0.25
CHD7-209ENST00000529472 PTPRFP10586 1907 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 EPB41L2O43491 1005 aaKnown RBP13.47□□□□□ -0.25
CHD7-209ENST00000529472 SPP2Q13103 211 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 MTMR2Q13614 643 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
CHD7-209ENST00000529472 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 ZIC5Q96T25 663 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 WDR18Q9BV38 432 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
CHD7-209ENST00000529472 IGKV6D-41A0A0C4DH26 115 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
CHD7-209ENST00000529472 NOGQ13253 232 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 SNAPC2Q13487 334 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 DGKZQ13574 1117 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 ZSWIM5Q9P217 1185 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 SNX14Q9Y5W7 946 aa13.46□□□□□ -0.25
CHD7-209ENST00000529472 A0A0G2JLL6 359 aaPredicted RBP13.45□□□□□ -0.26
CHD7-209ENST00000529472 A0A1W2PRG0 241 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 GTF2A2P52657 109 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 HMGCS2P54868 508 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
CHD7-209ENST00000529472 KRT32Q14532 448 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 ADCK5Q3MIX3 580 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 PRRT2Q7Z6L0 340 aaPredicted RBP13.45□□□□□ -0.26
CHD7-209ENST00000529472 IQCA1Q86XH1 822 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
CHD7-209ENST00000529472 KCNB2Q92953 911 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 JAKMIP1Q96N16 626 aaKnown RBP13.45□□□□□ -0.26
CHD7-209ENST00000529472 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 MTMR4Q9NYA4 1195 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 STX8Q9UNK0 236 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 KCNH4Q9UQ05 1017 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
CHD7-209ENST00000529472 CCL15-CCL14A0A0B4J2E2 113 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
CHD7-209ENST00000529472 CXCL11O14625 94 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 RAD21O60216 631 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 TTLL1O95922 423 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 NT5C2P49902 561 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 BACE1P56817 501 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
CHD7-209ENST00000529472 CCL15Q16663 113 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
CHD7-209ENST00000529472 BRI3BPQ8WY22 251 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
CHD7-209ENST00000529472 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
CHD7-209ENST00000529472 TNKSO95271 1327 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 PRC1O43663 620 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 CETPP11597 493 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 MCM5P33992 734 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 ANTXR2P58335 489 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 USP17L2Q6R6M4 530 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 ENAHQ8N8S7 591 aaPredicted RBP13.43□□□□□ -0.26
CHD7-209ENST00000529472 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
CHD7-209ENST00000529472 TCP11L1Q9NUJ3 509 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 NYAP2Q9P242 653 aa13.43□□□□□ -0.26
CHD7-209ENST00000529472 IFIT3O14879 490 aaKnown RBP13.42□□□□□ -0.26
CHD7-209ENST00000529472 CPA1P15085 419 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
CHD7-209ENST00000529472 MAP2K2P36507 400 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 USP14P54578 494 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 MOGSQ13724 837 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
CHD7-209ENST00000529472 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
CHD7-209ENST00000529472 SPICE1Q8N0Z3 855 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms