RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 GLRX3O76003 335 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 GH2P01242 217 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 CCNA1P78396 465 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 PRKCZQ05513 592 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 MTMR2Q13614 643 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 RRP1BQ14684 758 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 UBE3CQ15386 1083 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 TREML2Q5T2D2 321 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 CCDC17Q96LX7 622 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 RIOK1Q9BRS2 568 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 ECHDC1Q9NTX5 307 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 HOXC10Q9NYD6 342 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 MORF4L1Q9UBU8 362 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 ZNF532Q9HCE3 1301 aa9.44□□□□□ -0.9
CCDC90B-212ENST00000529312 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 LAMB1P07942 1786 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 GDF11O95390 407 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 CCL5P13501 91 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 CTGFP29279 349 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 MAPK4P31152 587 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 GJA8P48165 433 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 FEZ1Q99689 392 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 KIAA1683Q9H0B3 1180 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 CWC22Q9HCG8 908 aaKnown RBP9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 NDUFB9Q9Y6M9 179 aa9.43□□□□□ -0.9
CCDC90B-212ENST00000529312 ERC2O15083 957 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 SGPL1O95470 568 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 TFRCP02786 760 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 ADD2P35612 726 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 PLCD1P51178 756 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 HERVK_113P62684 666 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 AAMPQ13685 434 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 NUDT12Q9BQG2 462 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 RABGAP1Q9Y3P9 1069 aa9.42□□□□□ -0.9
CCDC90B-212ENST00000529312 TCRBV5S4A2TA0A5A2 114 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 MPHOSPH10O00566 681 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 XRCC5P13010 732 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 GABPAQ06546 454 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 COG2Q14746 738 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 MTFR1Q15390 333 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 C20orf194Q5TEA3 1177 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 GIMAP6Q6P9H5 292 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 CATSPERGQ6ZRH7 1159 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 DPF3Q92784 378 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 ZNF287Q9HBT7 754 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 RBPJLQ9UBG7 517 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 GJD2Q9UKL4 321 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 NR2E3Q9Y5X4 410 aa9.41□□□□□ -0.9
CCDC90B-212ENST00000529312 GNAT2P19087 354 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 SHMT1P34896 483 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 JAG1P78504 1218 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 C12orf60Q5U649 245 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 PLEKHH3Q7Z736 793 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 LCORLQ8N3X6 602 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 U2AF1L4Q8WU68 220 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 ARMT1Q9H993 441 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 SLC4A4Q9Y6R1 1079 aa9.4□□□□□ -0.9
CCDC90B-212ENST00000529312 DOCK2Q92608 1830 aa9.4□□□□□ -0.91
CCDC90B-212ENST00000529312 TTC41PQ6P2S7 1318 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 RPTORQ8N122 1335 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 USP17L21D6R901 530 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 RNF113AO15541 343 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 STRNO43815 780 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 MBD4O95243 580 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 HMGCRP04035 888 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 INHAP05111 366 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 ELNP15502 786 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 RGS2P41220 211 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 ERVK-9P63128 1117 aa9.39□□□□□ -0.91
CCDC90B-212ENST00000529312 ERVK-24P63145 666 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms