RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 DTNBO60941 627 aa29.01■■■□□ 2.23
LDLRAD3-203ENST00000528989 DCAF15Q66K64 600 aa29.01■■■□□ 2.23
LDLRAD3-203ENST00000528989 SGMS1Q86VZ5 419 aa29.01■■■□□ 2.23
LDLRAD3-203ENST00000528989 NECAB1Q8N987 351 aa29.01■■■□□ 2.23
LDLRAD3-203ENST00000528989 PLIN4Q96Q06 1357 aa29.01■■■□□ 2.23
LDLRAD3-203ENST00000528989 RXRAP19793 462 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 EVCP57679 992 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 BECN1Q14457 450 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 DGKHQ86XP1 1220 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZNF341Q9BYN7 854 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
LDLRAD3-203ENST00000528989 USP2O75604 605 aaPredicted RBP29■■■□□ 2.23
LDLRAD3-203ENST00000528989 PDIA3P30101 505 aaKnown RBP29■■■□□ 2.23
LDLRAD3-203ENST00000528989 SPRYD3Q8NCJ5 442 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZKSCAN4Q969J2 545 aaPredicted RBP29■■■□□ 2.23
LDLRAD3-203ENST00000528989 CHMP4CQ96CF2 233 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 HOOK2Q96ED9 719 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 WRNIP1Q96S55 665 aa29■■■□□ 2.23
LDLRAD3-203ENST00000528989 CCDC69A6NI79 296 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 TMEM179Q6ZVK1 233 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 CCDC84Q86UT8 332 aaPredicted RBP28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 SIAH1Q8IUQ4 282 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 KLRG1Q96E93 195 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 IPO9Q96P70 1041 aaKnown RBP28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 CABP5Q9NP86 173 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 MYH8P13535 1937 aa28.99■■■□□ 2.23
LDLRAD3-203ENST00000528989 APOA5Q6Q788 366 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 MOB2Q70IA6 237 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 TMTC2Q8N394 836 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 TMEM47Q9BQJ4 181 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 CLIP2Q9UDT6 1046 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZNF112Q9UJU3 913 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZBTB21Q9ULJ3 1066 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 HPS5Q9UPZ3 1129 aa28.98■■■□□ 2.23
LDLRAD3-203ENST00000528989 NOVP48745 357 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 CCT2P78371 535 aaKnown RBP28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 ATP2B2Q01814 1243 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 ST3GAL1Q11201 340 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 ANKS1AQ92625 1134 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 SLC12A7Q9Y666 1083 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 CCDC144CPQ8IYA2 1237 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 FOXD4L1Q9NU39 408 aa28.97■■■□□ 2.23
LDLRAD3-203ENST00000528989 EEF2P13639 858 aaKnown RBP28.96■■■□□ 2.23
LDLRAD3-203ENST00000528989 MICU3Q86XE3 530 aa28.96■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZNF274Q96GC6 653 aaPredicted RBP28.96■■■□□ 2.23
LDLRAD3-203ENST00000528989 KANSL2Q9H9L4 492 aa28.96■■■□□ 2.23
LDLRAD3-203ENST00000528989 NCOA5Q9HCD5 579 aaKnown RBP28.96■■■□□ 2.23
LDLRAD3-203ENST00000528989 GOLGA8BA8MQT2 603 aa28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 CTNND1O60716 968 aaKnown RBP28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 TTLL1O95922 423 aa28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZNF654Q8IZM8 581 aa28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZSCAN31Q96LW9 406 aaPredicted RBP28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 ZNF408Q9H9D4 720 aa28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 MTMR7Q9Y216 660 aa28.95■■■□□ 2.23
LDLRAD3-203ENST00000528989 SCRN1Q12765 414 aa28.95■■■□□ 2.22
LDLRAD3-203ENST00000528989 CCDC178Q5BJE1 867 aa28.95■■■□□ 2.22
LDLRAD3-203ENST00000528989 LRRC47Q8N1G4 583 aaKnown RBP28.95■■■□□ 2.22
LDLRAD3-203ENST00000528989 KAT14Q9H8E8 782 aa28.95■■■□□ 2.22
LDLRAD3-203ENST00000528989 ICA1Q05084 483 aa28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 RASGRP2Q7LDG7 609 aa28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 CCDC83Q8IWF9 413 aa28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 PNMA1Q8ND90 353 aa28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 NUP133Q8WUM0 1156 aa28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 SLKQ9H2G2 1235 aaPredicted RBP28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.94■■■□□ 2.22
LDLRAD3-203ENST00000528989 ZBTB43O43298 467 aa28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 PPP1R12BO60237 982 aaPredicted RBP28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 TROAPQ12815 778 aa28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 SH2B1Q9NRF2 756 aaPredicted RBP28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 A0A1W2PRG0 241 aa28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 ASNSP08243 561 aa28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 NF2P35240 595 aa28.93■■■□□ 2.22
LDLRAD3-203ENST00000528989 GREB1LQ9C091 1923 aaPredicted RBP28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 KIF3CO14782 793 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 PFKFB2O60825 505 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 TOP1P11387 765 aaKnown RBP28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 ECE1P42892 770 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 CHADLQ6NUI6 762 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 CATIPQ7Z7H3 387 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 ACER1Q8TDN7 264 aa28.92■■■□□ 2.22
LDLRAD3-203ENST00000528989 PPFIA3O75145 1194 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 ITGBL1O95965 494 aaPredicted RBP28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 TTLL12Q14166 644 aaPredicted RBP28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 SYNE3Q6ZMZ3 975 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 NYAP2Q9P242 653 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 CDC27P30260 824 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 ADD1P35611 737 aaKnown RBP28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 CUL4AQ13619 759 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 SCYL3Q8IZE3 742 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 GTF3C6Q969F1 213 aa28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 FAM217BQ9NTX9 383 aaPredicted RBP28.91■■■□□ 2.22
LDLRAD3-203ENST00000528989 METAP2P50579 478 aaKnown RBP eCLIP28.9■■■□□ 2.22
LDLRAD3-203ENST00000528989 FANCBQ8NB91 859 aa28.89■■■□□ 2.22
LDLRAD3-203ENST00000528989 MKL1Q969V6 931 aa28.89■■■□□ 2.22
LDLRAD3-203ENST00000528989 DAXXQ9UER7 740 aaPredicted RBP28.89■■■□□ 2.22
LDLRAD3-203ENST00000528989 GOLGA8AA7E2F4 631 aa28.89■■■□□ 2.21
LDLRAD3-203ENST00000528989 MAP3K9P80192 1104 aa28.89■■■□□ 2.21
LDLRAD3-203ENST00000528989 VGLL4Q14135 290 aa28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms