RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CDK11BP21127 795 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 AKAP17AQ02040 695 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 DPYDQ12882 1025 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 NPY5RQ15761 445 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 CDKAL1Q5VV42 579 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 CATIPQ7Z7H3 387 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 ENAHQ8N8S7 591 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 MIGA1Q8NAN2 632 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 LRRN4CLQ8ND94 238 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 NUP133Q8WUM0 1156 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 GSDMAQ96QA5 445 aa9.55□□□□□ -0.88
CSTF3-208ENST00000528865 PYM1Q9BRP8 204 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 NAA15Q9BXJ9 866 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 SAMSN1Q9NSI8 373 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 BSDC1Q9NW68 430 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 THRAP3Q9Y2W1 955 aaKnown RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 V9GYY5 206 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-208ENST00000528865 COL22A1Q8NFW1 1626 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 A0A087X0B3 334 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 MINDY4BA8MYZ0 360 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 AKR1B15C9JRZ8 316 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ATP6V1AP38606 617 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 CLCN6P51797 869 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 SIK1P57059 783 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ATP2C1P98194 919 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ITPK1Q13572 414 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 TERF2Q15554 542 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 SBK1Q52WX2 424 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 EARS2Q5JPH6 523 aaKnown RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 RSRC2Q7L4I2 434 aaKnown RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 CMTR1Q8N1G2 835 aaKnown RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 UBXN4Q92575 508 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ANKS1AQ92625 1134 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 CCDC51Q96ER9 411 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 FAM84BQ96KN1 310 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 CTAGE1Q96RT6 745 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 VPS54Q9P1Q0 977 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ADD3Q9UEY8 706 aaKnown RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-208ENST00000528865 ITIH6Q6UXX5 1313 aa9.54□□□□□ -0.88
CSTF3-208ENST00000528865 LAMB2P55268 1798 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 CASQ1P31415 396 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 TUBB2AQ13885 445 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 E2F4Q16254 413 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 TTC38Q5R3I4 469 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 CTR9Q6PD62 1173 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 ANKRD18AQ8IVF6 992 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 GRAMD1CQ8IYS0 662 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 ZNF384Q8TF68 577 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 SDR42E1Q8WUS8 393 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 SMARCC1Q92922 1105 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 TUBB2BQ9BVA1 445 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 CARD6Q9BX69 1037 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 LIMA1Q9UHB6 759 aaKnown RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-208ENST00000528865 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
CSTF3-208ENST00000528865 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 SMIM22K7EJ46 135 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 TEX33O43247 280 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 PLEKHA8P1O95397 391 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 GYG1P46976 350 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 PLA2G4AP47712 749 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 GNG11P61952 73 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 DYNLL1P63167 89 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 CACNA1SQ13698 1873 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF827Q17R98 1081 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 ARL6IP4Q66PJ3 421 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 TOGARAM2Q6ZUX3 1019 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 IQCA1Q86XH1 822 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 TRMT44Q8IYL2 757 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 SRBD1Q8N5C6 995 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 PDILTQ8N807 584 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 C4orf32Q8N8J7 132 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms