RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
CMTM1-210ENST00000528441 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 C17orf99Q6UX52 265 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 KBTBD3Q8NAB2 608 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 APPBP2Q92624 585 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 COA7Q96BR5 231 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 EHD4Q9H223 541 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 DNAJC18Q9H819 358 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-210ENST00000528441 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
CMTM1-210ENST00000528441 SLC45A1Q9Y2W3 748 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 RNF113AO15541 343 aaKnown RBP10.88□□□□□ -0.67
CMTM1-210ENST00000528441 GNRH1P01148 92 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 USP14P54578 494 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 PRMT2P55345 433 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 UBXN2AP68543 259 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 SHROOM1Q2M3G4 852 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-210ENST00000528441 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 SH3TC2Q8TF17 1288 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 WDR18Q9BV38 432 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 NACAP1Q9BZK3 213 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 LNPKQ9C0E8 428 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
CMTM1-210ENST00000528441 MKNK2Q9HBH9 465 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 ARHGEF10LQ9HCE6 1279 aa10.88□□□□□ -0.67
CMTM1-210ENST00000528441 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L21D6R901 530 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 CHGBP05060 677 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 GCLCP48506 637 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-210ENST00000528441 AAMPQ13685 434 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 MOGSQ13724 837 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 SEPT2Q15019 361 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 SLC44A5Q8NCS7 719 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-210ENST00000528441 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-210ENST00000528441 SH2D4AQ9H788 454 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 LOC285556D6RIA3 1793 aa10.87□□□□□ -0.67
CMTM1-210ENST00000528441 CYP2D7A0A087X1C5 515 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 GPAA1O43292 621 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 SLC3A2P08195 630 aaKnown RBP10.86□□□□□ -0.67
CMTM1-210ENST00000528441 GNAT2P19087 354 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 SHMT1P34896 483 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 ICA1Q05084 483 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 PRKCZQ05513 592 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 NAPBQ9H115 298 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 ZNF287Q9HBT7 754 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 MGAMO43451 1857 aa10.86□□□□□ -0.67
CMTM1-210ENST00000528441 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 BCRP11274 1271 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 AKR1B1P15121 316 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 GRK4P32298 578 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 HERVK_113P62684 666 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 JAG1P78504 1218 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-210ENST00000528441 GSE1Q14687 1217 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
CMTM1-210ENST00000528441 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
CMTM1-210ENST00000528441 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-210ENST00000528441 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-210ENST00000528441 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 M0R2C6 588 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 MAP3K13O43283 966 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 CDK8P49336 464 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 CCNA1P78396 465 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 PLS1Q14651 629 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 ZNF444Q8N0Y2 327 aaPredicted RBP10.84□□□□□ -0.67
CMTM1-210ENST00000528441 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
CMTM1-210ENST00000528441 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
CMTM1-210ENST00000528441 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
CMTM1-210ENST00000528441 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms