RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
CAPN1-214ENST00000528165 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
CAPN1-214ENST00000528165 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-214ENST00000528165 COG1Q8WTW3 980 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 NR5A1Q13285 461 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 TRIM14Q14142 442 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 MMS22LQ6ZRQ5 1243 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 TRAPPC11Q7Z392 1133 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 GSDMAQ96QA5 445 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
CAPN1-214ENST00000528165 ADD2P35612 726 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 LIFRP42702 1097 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 KRT31Q15323 416 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 SUGP1Q8IWZ8 645 aaKnown RBP16.55■□□□□ 0.24
CAPN1-214ENST00000528165 RIN2Q8WYP3 895 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-214ENST00000528165 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
CAPN1-214ENST00000528165 NCAPGQ9BPX3 1015 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 NLRP2Q9NX02 1062 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 CTNND2Q9UQB3 1225 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 CASP1P29466 404 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 CDC25AP30304 524 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 KRT9P35527 623 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 MYCBPQ99417 103 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-214ENST00000528165 PPP1R3GB7ZBB8 358 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 ENC1O14682 589 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 GGCXP38435 758 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 VPS16Q9H269 839 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 SAR1BQ9Y6B6 198 aa16.55■□□□□ 0.24
CAPN1-214ENST00000528165 MYH8P13535 1937 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 TARSL2A2RTX5 802 aaKnown RBP16.54■□□□□ 0.24
CAPN1-214ENST00000528165 PSMD14O00487 310 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 MMS19Q96T76 1030 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 AATFQ9NY61 560 aaKnown RBP eCLIP16.54■□□□□ 0.24
CAPN1-214ENST00000528165 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 TRIM10Q9UDY6 481 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-214ENST00000528165 A0A087X0B3 334 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 NDUFA10O95299 355 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 RPGRIP1Q96KN7 1286 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 LIMA1Q9UHB6 759 aaKnown RBP16.54■□□□□ 0.24
CAPN1-214ENST00000528165 MST1RQ04912 1400 aa16.54■□□□□ 0.24
CAPN1-214ENST00000528165 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 ERLIN2O94905 339 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 CKAP4Q07065 602 aaKnown RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 DPYDQ12882 1025 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 RTN1Q16799 776 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 HAUS4Q9H6D7 363 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 GOLGA6CA6NDK9 693 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 EBAG9O00559 213 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 DEXIO95424 95 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 GOLGA6DP0CG33 693 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 SPAG1Q07617 926 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 GOLGA6AQ9NYA3 693 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
CAPN1-214ENST00000528165 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
CAPN1-214ENST00000528165 COBLO75128 1261 aa16.52■□□□□ 0.24
CAPN1-214ENST00000528165 MCAMP43121 646 aa16.52■□□□□ 0.24
CAPN1-214ENST00000528165 CCT5P48643 541 aa16.52■□□□□ 0.24
CAPN1-214ENST00000528165 COPB1P53618 953 aaKnown RBP16.52■□□□□ 0.24
CAPN1-214ENST00000528165 SART3Q15020 963 aaKnown RBP16.52■□□□□ 0.24
CAPN1-214ENST00000528165 CHP1Q99653 195 aa16.52■□□□□ 0.24
CAPN1-214ENST00000528165 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
CAPN1-214ENST00000528165 LRRC10BA6NIK2 292 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 TRIM75PA6NK02 468 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 EXOC5O00471 708 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 ZMYND10O75800 440 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 ATP1A1P05023 1023 aaKnown RBP16.52■□□□□ 0.23
CAPN1-214ENST00000528165 CABP4P57796 275 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 E2F4Q16254 413 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 OXER1Q8TDS5 423 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 KAT14Q9H8E8 782 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms