RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TRIM47Q96LD4 638 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 C12orf42Q96LP6 360 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 CCDC17Q96LX7 622 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 SEC62Q99442 399 aaKnown RBP31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 KIAA1683Q9H0B3 1180 aa31.57■■■□□ 2.64
TSPAN4-217ENST00000527644 SMIM22K7EJ46 135 aa31.56■■■□□ 2.64
TSPAN4-217ENST00000527644 IRX3P78415 501 aaPredicted RBP31.56■■■□□ 2.64
TSPAN4-217ENST00000527644 ACER1Q8TDN7 264 aa31.56■■■□□ 2.64
TSPAN4-217ENST00000527644 ECM2O94769 699 aaPredicted RBP31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 APPP05067 770 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 FCGRTP55899 365 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 PLEKHM2Q8IWE5 1019 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 ANKRD13CQ8N6S4 541 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 OSBPL3Q9H4L5 887 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 PTCH2Q9Y6C5 1203 aa31.55■■■□□ 2.64
TSPAN4-217ENST00000527644 ZSWIM8A7E2V4 1837 aa31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 RGS19P49795 217 aa31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 FAM110CQ1W6H9 321 aa31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 NACAP1Q9BZK3 213 aa31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 EPB41L4AQ9HCS5 686 aaPredicted RBP31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 SRRDQ9UH36 339 aa31.54■■■□□ 2.64
TSPAN4-217ENST00000527644 AKR1B1P15121 316 aa31.53■■■□□ 2.64
TSPAN4-217ENST00000527644 TDO2P48775 406 aa31.53■■■□□ 2.64
TSPAN4-217ENST00000527644 ZYXQ15942 572 aaKnown RBP31.53■■■□□ 2.64
TSPAN4-217ENST00000527644 IFNL3Q8IZI9 196 aa31.53■■■□□ 2.64
TSPAN4-217ENST00000527644 MYH8P13535 1937 aa31.53■■■□□ 2.64
TSPAN4-217ENST00000527644 MINDY4BA8MYZ0 360 aa31.52■■■□□ 2.64
TSPAN4-217ENST00000527644 ARMC5Q96C12 935 aa31.52■■■□□ 2.64
TSPAN4-217ENST00000527644 P2RX7Q99572 595 aaKnown RBP31.52■■■□□ 2.64
TSPAN4-217ENST00000527644 HTTP42858 3142 aa31.52■■■□□ 2.64
TSPAN4-217ENST00000527644 SOX10P56693 466 aa31.51■■■□□ 2.63
TSPAN4-217ENST00000527644 TRIM6-TRIM34B2RNG4 842 aa31.5■■■□□ 2.63
TSPAN4-217ENST00000527644 HELLSQ9NRZ9 838 aa31.5■■■□□ 2.63
TSPAN4-217ENST00000527644 ROBO3Q96MS0 1386 aa31.5■■■□□ 2.63
TSPAN4-217ENST00000527644 A0A1W2PRG0 241 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L15C9J2P7 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L13C9JLJ4 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L11C9JVI0 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L18D6R9N7 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L22D6RA61 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L17D6RBQ6 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L19D6RCP7 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L20D6RJB6 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 HERVK_113P62684 666 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 USP17L24Q0WX57 530 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 SLC9C1Q4G0N8 1177 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 NBPF11Q86T75 865 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 GTF3C2Q8WUA4 911 aaPredicted RBP31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 MYPNQ86TC9 1320 aa31.49■■■□□ 2.63
TSPAN4-217ENST00000527644 VCAM1P19320 739 aa31.48■■■□□ 2.63
TSPAN4-217ENST00000527644 RILPL2Q969X0 211 aa31.48■■■□□ 2.63
TSPAN4-217ENST00000527644 MKNK2Q9HBH9 465 aa31.48■■■□□ 2.63
TSPAN4-217ENST00000527644 ARHGEF10LQ9HCE6 1279 aa31.48■■■□□ 2.63
TSPAN4-217ENST00000527644 MORF4L1Q9UBU8 362 aa31.48■■■□□ 2.63
TSPAN4-217ENST00000527644 MGAMO43451 1857 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 ICA1Q05084 483 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 CATSPERGQ6ZRH7 1159 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 CCDC129Q6ZRS4 1044 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 NAPBQ9H115 298 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 ZNF287Q9HBT7 754 aa31.47■■■□□ 2.63
TSPAN4-217ENST00000527644 TNPO2O14787 897 aaKnown RBP31.46■■■□□ 2.63
TSPAN4-217ENST00000527644 SIAH1Q8IUQ4 282 aa31.46■■■□□ 2.63
TSPAN4-217ENST00000527644 RAET1EQ8TD07 263 aa31.46■■■□□ 2.63
TSPAN4-217ENST00000527644 SH2D4AQ9H788 454 aa31.46■■■□□ 2.63
TSPAN4-217ENST00000527644 KANSL2Q9H9L4 492 aa31.46■■■□□ 2.63
TSPAN4-217ENST00000527644 PRKCZQ05513 592 aa31.45■■■□□ 2.63
TSPAN4-217ENST00000527644 MCMDC2Q4G0Z9 681 aa31.45■■■□□ 2.63
TSPAN4-217ENST00000527644 STK11IPQ8N1F8 1099 aa31.45■■■□□ 2.63
TSPAN4-217ENST00000527644 ZNF333Q96JL9 665 aa31.45■■■□□ 2.63
TSPAN4-217ENST00000527644 TMX2Q9Y320 296 aa31.45■■■□□ 2.63
TSPAN4-217ENST00000527644 RASA1P20936 1047 aa31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 GPRC5AQ8NFJ5 357 aa31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 COA7Q96BR5 231 aa31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 FAM227BQ96M60 508 aa31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 RPAP3Q9H6T3 665 aaPredicted RBP31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 RBPJLQ9UBG7 517 aa31.44■■■□□ 2.62
TSPAN4-217ENST00000527644 CLEC10AQ8IUN9 316 aa31.43■■■□□ 2.62
TSPAN4-217ENST00000527644 GABRQQ9UN88 632 aa31.43■■■□□ 2.62
TSPAN4-217ENST00000527644 SLC3A2P08195 630 aaKnown RBP31.42■■■□□ 2.62
TSPAN4-217ENST00000527644 MLLT1Q03111 559 aaPredicted RBP31.42■■■□□ 2.62
TSPAN4-217ENST00000527644 LPAR1Q92633 364 aa31.42■■■□□ 2.62
TSPAN4-217ENST00000527644 TXNRD2Q9NNW7 524 aa31.42■■■□□ 2.62
TSPAN4-217ENST00000527644 A0A0D9SFI3 127 aa31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 FOXP2O15409 715 aa31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 EEF2P13639 858 aaKnown RBP31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 PPARAQ07869 468 aa31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 ZNF444Q8N0Y2 327 aaPredicted RBP31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 SH3TC2Q8TF17 1288 aa31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 VCPKMTQ9H867 229 aa31.41■■■□□ 2.62
TSPAN4-217ENST00000527644 SDSP20132 328 aa31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 GRK4P32298 578 aa31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 FLT3LGP49771 235 aa31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 PDE4BQ07343 736 aa31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 NMIQ13287 307 aaPredicted RBP31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 RABGAP1Q9Y3P9 1069 aa31.4■■■□□ 2.62
TSPAN4-217ENST00000527644 ERVK-9P63128 1117 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 ERVK-24P63145 666 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 ATP2B2Q01814 1243 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 VPS53Q5VIR6 699 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms