RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 TDO2P48775 406 aa20.18■□□□□ 0.82
NR1H3-229ENST00000527464 PRMT2P55345 433 aa20.18■□□□□ 0.82
NR1H3-229ENST00000527464 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
NR1H3-229ENST00000527464 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
NR1H3-229ENST00000527464 SEPT2Q15019 361 aa20.17■□□□□ 0.82
NR1H3-229ENST00000527464 IFNL3Q8IZI9 196 aa20.17■□□□□ 0.82
NR1H3-229ENST00000527464 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-229ENST00000527464 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
NR1H3-229ENST00000527464 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-229ENST00000527464 EMILIN3Q9NT22 766 aa20.17■□□□□ 0.82
NR1H3-229ENST00000527464 HOXD10P28358 340 aa20.16■□□□□ 0.82
NR1H3-229ENST00000527464 IRX3P78415 501 aaPredicted RBP20.16■□□□□ 0.82
NR1H3-229ENST00000527464 CAP1Q01518 475 aa20.16■□□□□ 0.82
NR1H3-229ENST00000527464 FAM110CQ1W6H9 321 aa20.16■□□□□ 0.82
NR1H3-229ENST00000527464 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 AKR1B1P15121 316 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 PSMC4P43686 418 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 ACER1Q8TDN7 264 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-229ENST00000527464 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 NAPBQ9H115 298 aa20.15■□□□□ 0.82
NR1H3-229ENST00000527464 SMIM22K7EJ46 135 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 FCGRTP55899 365 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 SH2D4AQ9H788 454 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 ARHGEF10LQ9HCE6 1279 aa20.14■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L15C9J2P7 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L13C9JLJ4 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L11C9JVI0 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L18D6R9N7 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L22D6RA61 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L17D6RBQ6 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L19D6RCP7 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L20D6RJB6 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 HIP1O00291 1037 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 FMNL1O95466 1100 aaPredicted RBP20.13■□□□□ 0.81
NR1H3-229ENST00000527464 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
NR1H3-229ENST00000527464 USP17L24Q0WX57 530 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 MGAMO43451 1857 aa20.13■□□□□ 0.81
NR1H3-229ENST00000527464 HTTP42858 3142 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 SDSP20132 328 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 RASA1P20936 1047 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
NR1H3-229ENST00000527464 ICA1Q05084 483 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 ALX1Q15699 326 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 ZYXQ15942 572 aaKnown RBP20.12■□□□□ 0.81
NR1H3-229ENST00000527464 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 ANKRD13CQ8N6S4 541 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 FAM227BQ96M60 508 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 P2RX7Q99572 595 aaKnown RBP20.12■□□□□ 0.81
NR1H3-229ENST00000527464 MORF4L1Q9UBU8 362 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 TMX2Q9Y320 296 aa20.12■□□□□ 0.81
NR1H3-229ENST00000527464 A0A0D9SFI3 127 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 A0A1W2PRG0 241 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 VCAM1P19320 739 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 PDE4AP27815 886 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 CTGFP29279 349 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 HERVK_113P62684 666 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 PDE4BQ07343 736 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 NMIQ13287 307 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-229ENST00000527464 LPAR1Q92633 364 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
NR1H3-229ENST00000527464 ZSWIM8A7E2V4 1837 aa20.11■□□□□ 0.81
NR1H3-229ENST00000527464 GREB1LQ9C091 1923 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-229ENST00000527464 FOXP2O15409 715 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 PPARAQ07869 468 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 CATSPERGQ6ZRH7 1159 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 ZNF444Q8N0Y2 327 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-229ENST00000527464 ARMC5Q96C12 935 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 PTCH2Q9Y6C5 1203 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 DOCK3Q8IZD9 2030 aa20.1■□□□□ 0.81
NR1H3-229ENST00000527464 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
NR1H3-229ENST00000527464 NBPF11Q86T75 865 aa20.09■□□□□ 0.81
NR1H3-229ENST00000527464 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
NR1H3-229ENST00000527464 ZMYM6O95789 1325 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 TNPO2O14787 897 aaKnown RBP20.08■□□□□ 0.81
NR1H3-229ENST00000527464 EEF2P13639 858 aaKnown RBP20.08■□□□□ 0.81
NR1H3-229ENST00000527464 RGS19P49795 217 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 TTC22Q5TAA0 569 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 VPS53Q5VIR6 699 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 LBX2Q6XYB7 198 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
NR1H3-229ENST00000527464 RPAP3Q9H6T3 665 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-229ENST00000527464 VCPKMTQ9H867 229 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 ANAPC4Q9UJX5 808 aa20.08■□□□□ 0.81
NR1H3-229ENST00000527464 MYPNQ86TC9 1320 aa20.07■□□□□ 0.8
NR1H3-229ENST00000527464 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
NR1H3-229ENST00000527464 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
NR1H3-229ENST00000527464 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
NR1H3-229ENST00000527464 COA7Q96BR5 231 aa20.07■□□□□ 0.8
NR1H3-229ENST00000527464 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
NR1H3-229ENST00000527464 RABGAP1Q9Y3P9 1069 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms