RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 TMEM179Q6ZVK1 233 aa22.35■■□□□ 1.17
UBXN1-208ENST00000527421 SEC62Q99442 399 aaKnown RBP22.35■■□□□ 1.17
UBXN1-208ENST00000527421 ASCC2Q9H1I8 757 aaPredicted RBP22.35■■□□□ 1.17
UBXN1-208ENST00000527421 APPP05067 770 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 GCLCP48506 637 aaPredicted RBP22.34■■□□□ 1.17
UBXN1-208ENST00000527421 USP14P54578 494 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 FCGRTP55899 365 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 ZYXQ15942 572 aaKnown RBP22.34■■□□□ 1.17
UBXN1-208ENST00000527421 SBK1Q52WX2 424 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 ANKRD13CQ8N6S4 541 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 C12orf42Q96LP6 360 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 CCDC17Q96LX7 622 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 KIAA1683Q9H0B3 1180 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 EPB41L4AQ9HCS5 686 aaPredicted RBP22.34■■□□□ 1.17
UBXN1-208ENST00000527421 EMILIN3Q9NT22 766 aa22.34■■□□□ 1.17
UBXN1-208ENST00000527421 FMNL1O95466 1100 aaPredicted RBP22.33■■□□□ 1.17
UBXN1-208ENST00000527421 AKR1B1P15121 316 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 CTGFP29279 349 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 HOXA7P31268 230 aaPredicted RBP22.33■■□□□ 1.17
UBXN1-208ENST00000527421 PRMT2P55345 433 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 FAM110CQ1W6H9 321 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 PLEKHM2Q8IWE5 1019 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 ACER1Q8TDN7 264 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 TRIM47Q96LD4 638 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 NACAP1Q9BZK3 213 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 PTCH2Q9Y6C5 1203 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 ROBO3Q96MS0 1386 aa22.33■■□□□ 1.17
UBXN1-208ENST00000527421 MINDY4BA8MYZ0 360 aa22.32■■□□□ 1.16
UBXN1-208ENST00000527421 TRIM6-TRIM34B2RNG4 842 aa22.32■■□□□ 1.16
UBXN1-208ENST00000527421 PATL2C9JE40 543 aaKnown RBP22.32■■□□□ 1.16
UBXN1-208ENST00000527421 HOXD10P28358 340 aa22.32■■□□□ 1.16
UBXN1-208ENST00000527421 OSBPL3Q9H4L5 887 aa22.32■■□□□ 1.16
UBXN1-208ENST00000527421 SOX10P56693 466 aa22.31■■□□□ 1.16
UBXN1-208ENST00000527421 TICAM2Q86XR7 235 aa22.31■■□□□ 1.16
UBXN1-208ENST00000527421 SRRDQ9UH36 339 aa22.31■■□□□ 1.16
UBXN1-208ENST00000527421 ICA1Q05084 483 aa22.3■■□□□ 1.16
UBXN1-208ENST00000527421 IFNL3Q8IZI9 196 aa22.3■■□□□ 1.16
UBXN1-208ENST00000527421 MYPNQ86TC9 1320 aa22.3■■□□□ 1.16
UBXN1-208ENST00000527421 GREB1LQ9C091 1923 aaPredicted RBP22.29■■□□□ 1.16
UBXN1-208ENST00000527421 VCAM1P19320 739 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 HERVK_113P62684 666 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 CLEC10AQ8IUN9 316 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 RILPL2Q969X0 211 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 ARMC5Q96C12 935 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 NAPBQ9H115 298 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 ARHGEF10LQ9HCE6 1279 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 HELLSQ9NRZ9 838 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 HTTP42858 3142 aa22.29■■□□□ 1.16
UBXN1-208ENST00000527421 A0A1W2PRG0 241 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L15C9J2P7 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L13C9JLJ4 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L11C9JVI0 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L18D6R9N7 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L22D6RA61 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L17D6RBQ6 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L19D6RCP7 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L20D6RJB6 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 TNPO2O14787 897 aaKnown RBP22.28■■□□□ 1.16
UBXN1-208ENST00000527421 USP17L24Q0WX57 530 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 GTF3C2Q8WUA4 911 aaPredicted RBP22.28■■□□□ 1.16
UBXN1-208ENST00000527421 P2RX7Q99572 595 aaKnown RBP22.28■■□□□ 1.16
UBXN1-208ENST00000527421 MKNK2Q9HBH9 465 aa22.28■■□□□ 1.16
UBXN1-208ENST00000527421 RAET1EQ8TD07 263 aa22.27■■□□□ 1.16
UBXN1-208ENST00000527421 ZNF287Q9HBT7 754 aa22.27■■□□□ 1.16
UBXN1-208ENST00000527421 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
UBXN1-208ENST00000527421 RBBP6Q7Z6E9 1792 aaKnown RBP22.26■■□□□ 1.15
UBXN1-208ENST00000527421 A0A0D9SFI3 127 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 RASA1P20936 1047 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 PRKCZQ05513 592 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 RPAP3Q9H6T3 665 aaPredicted RBP22.26■■□□□ 1.15
UBXN1-208ENST00000527421 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
UBXN1-208ENST00000527421 SLC3A2P08195 630 aaKnown RBP22.25■■□□□ 1.15
UBXN1-208ENST00000527421 NMIQ13287 307 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-208ENST00000527421 MCMDC2Q4G0Z9 681 aa22.25■■□□□ 1.15
UBXN1-208ENST00000527421 DOCK3Q8IZD9 2030 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 ATP2B2Q01814 1243 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 PPARAQ07869 468 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 SIAH1Q8IUQ4 282 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 GPRC5AQ8NFJ5 357 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 LPAR1Q92633 364 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 COA7Q96BR5 231 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 ZNF333Q96JL9 665 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 TMX2Q9Y320 296 aa22.24■■□□□ 1.15
UBXN1-208ENST00000527421 FOXP2O15409 715 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
UBXN1-208ENST00000527421 PDE4BQ07343 736 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 SH3TC2Q8TF17 1288 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 PAGR1Q9BTK6 254 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 VCPKMTQ9H867 229 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 TXNRD2Q9NNW7 524 aa22.23■■□□□ 1.15
UBXN1-208ENST00000527421 GABRQQ9UN88 632 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms