RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMEM179Q6ZVK1 233 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-205ENST00000527046 MKL1Q969V6 931 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.37
NEDD8-205ENST00000527046 KDM4AO75164 1064 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 ZBTB48P10074 688 aaPredicted RBP12.76□□□□□ -0.37
NEDD8-205ENST00000527046 EEF2P13639 858 aaKnown RBP12.76□□□□□ -0.37
NEDD8-205ENST00000527046 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
NEDD8-205ENST00000527046 SEC23AQ15436 765 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 SH3D19Q5HYK7 790 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 THSD7BQ9C0I4 1608 aa12.76□□□□□ -0.37
NEDD8-205ENST00000527046 CXCL11O14625 94 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
NEDD8-205ENST00000527046 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
NEDD8-205ENST00000527046 TM4SF4P48230 202 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
NEDD8-205ENST00000527046 RAB3GAP1Q15042 981 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
NEDD8-205ENST00000527046 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 ZNF280CQ8ND82 737 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 IGDCC4Q8TDY8 1250 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 ANKS1AQ92625 1134 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 KIF2CQ99661 725 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 KANSL2Q9H9L4 492 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
NEDD8-205ENST00000527046 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 NYAP2Q9P242 653 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 TMX2Q9Y320 296 aa12.75□□□□□ -0.37
NEDD8-205ENST00000527046 A0A0G2JLL6 359 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-205ENST00000527046 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 IGF2BP3O00425 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEDD8-205ENST00000527046 MPHOSPH10O00566 681 aaKnown RBP12.74□□□□□ -0.37
NEDD8-205ENST00000527046 CPA1P15085 419 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 BACE1P56817 501 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 PRRT2Q7Z6L0 340 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-205ENST00000527046 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
NEDD8-205ENST00000527046 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-205ENST00000527046 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 MAP2K2P36507 400 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 NCOA7Q8NI08 942 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 ESR2Q92731 530 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 KRT23Q9C075 422 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 ZNF287Q9HBT7 754 aa12.73□□□□□ -0.37
NEDD8-205ENST00000527046 RLFQ13129 1914 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 LOC285556D6RIA3 1793 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 USP17L10C9JJH3 530 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 HMGCS2P54868 508 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 ICA1Q05084 483 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 NOGQ13253 232 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 MTMR2Q13614 643 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 TREML2Q5T2D2 321 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 FAM43AQ8N2R8 423 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-205ENST00000527046 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-205ENST00000527046 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
NEDD8-205ENST00000527046 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-205ENST00000527046 C19orf81C9J6K1 198 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 GTF2A2P52657 109 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 GRM1Q13255 1194 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 CCL15Q16663 113 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 TTC14Q96N46 770 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
NEDD8-205ENST00000527046 F5H6K3 240 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 TTLL1O95922 423 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 CETPP11597 493 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
NEDD8-205ENST00000527046 NT5C2P49902 561 aa12.7□□□□□ -0.38
NEDD8-205ENST00000527046 KLRC3Q07444 240 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms