RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
FOXRED1-207ENST00000527004 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
FOXRED1-207ENST00000527004 TIGD1Q96MW7 591 aa18.27■□□□□ 0.52
FOXRED1-207ENST00000527004 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
FOXRED1-207ENST00000527004 G3V3G9 751 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 CUTAO60888 179 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 CDK8P49336 464 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 FKBP1AP62942 108 aaKnown RBP18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 ANO6Q4KMQ2 910 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 DCAF8Q5TAQ9 597 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 HHIPL2Q6UWX4 724 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 PNMA1Q8ND90 353 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 CNKSR1Q969H4 720 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 MRIQ9BWK5 157 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 BRMS1Q9HCU9 246 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 SAP30BPQ9UHR5 308 aaKnown RBP18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 CEP131Q9UPN4 1083 aa18.27■□□□□ 0.51
FOXRED1-207ENST00000527004 KRT2P35908 639 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 TOB1P50616 345 aaPredicted RBP18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 CERS5Q8N5B7 392 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 SDF4Q9BRK5 362 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 USP25Q9UHP3 1055 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 HPSEQ9Y251 543 aa18.26■□□□□ 0.51
FOXRED1-207ENST00000527004 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 COL11A2P13942 1736 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 ZNF202O95125 648 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 GRM4Q14833 912 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 STX1AQ16623 288 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 SLC4A8Q2Y0W8 1093 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 TTF2Q9UNY4 1162 aaKnown RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 SCG2P13521 617 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 PFKFB1P16118 471 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 ZNF165P49910 485 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 KRI1Q8N9T8 703 aaKnown RBP18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
FOXRED1-207ENST00000527004 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 USP17L3A6NCW0 530 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 USP17L4A6NCW7 530 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 ADCY5O95622 1261 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 CLCN1P35523 988 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 NOVP48745 357 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 NR5A1Q13285 461 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 RESP18Q5W5W9 173 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 CC2D2BQ6DHV5 1058 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 USP17L1Q7RTZ2 530 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 SHISA4Q96DD7 197 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 CBX8Q9HC52 389 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 ANO10Q9NW15 660 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 QSER1Q2KHR3 1735 aa18.24■□□□□ 0.51
FOXRED1-207ENST00000527004 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 ZNF579Q8NAF0 562 aaKnown RBP18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 OXER1Q8TDS5 423 aa18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 FBXW7Q969H0 707 aa18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 CABP5Q9NP86 173 aa18.23■□□□□ 0.51
FOXRED1-207ENST00000527004 BMP15O95972 392 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 PTPREP23469 700 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 SYKP43405 635 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 ELOA2Q8IYF1 753 aaPredicted RBP18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 TEKT1Q969V4 418 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 TMEM47Q9BQJ4 181 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 RTN4Q9NQC3 1192 aaKnown RBP18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 GABPAQ06546 454 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 TNFRSF25Q93038 417 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 DNAJC25Q9H1X3 360 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 MAD2L2Q9UI95 211 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
FOXRED1-207ENST00000527004 SNED1Q8TER0 1413 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 CALML3P27482 149 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 SMARCA1P28370 1054 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 NPY5RQ15761 445 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 LUZP1Q86V48 1076 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 C7orf43Q8WVR3 580 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 SRPRBQ9Y5M8 271 aaKnown RBP18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 MYO3BQ8WXR4 1341 aa18.21■□□□□ 0.51
FOXRED1-207ENST00000527004 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
FOXRED1-207ENST00000527004 hCG_1642624A0A1W2PR95 340 aa18.2■□□□□ 0.5
FOXRED1-207ENST00000527004 TRIM75PA6NK02 468 aa18.2■□□□□ 0.5
FOXRED1-207ENST00000527004 F8W031 263 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms