RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
SSRP1-203ENST00000526696 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
SSRP1-203ENST00000526696 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
SSRP1-203ENST00000526696 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 SEMA3EO15041 775 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
SSRP1-203ENST00000526696 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 FAM47AQ5JRC9 791 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 WDR78Q5VTH9 848 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 PHF24Q9UPV7 400 aa16.86■□□□□ 0.29
SSRP1-203ENST00000526696 TRANK1O15050 2925 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 FAM86C2PA6NEL3 165 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 SEPT4O43236 478 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
SSRP1-203ENST00000526696 ADORA1P30542 326 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 MECOMQ03112 1051 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 PRAMEF19Q5SWL8 479 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 GNL3LQ9NVN8 582 aaKnown RBP16.85■□□□□ 0.29
SSRP1-203ENST00000526696 BTBD7Q9P203 1132 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 ABCF2Q9UG63 623 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 IL16Q14005 1332 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 CACNA1AO00555 2505 aa16.85■□□□□ 0.29
SSRP1-203ENST00000526696 ZBTB22O15209 634 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
SSRP1-203ENST00000526696 ASNSP08243 561 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 FAAP100Q0VG06 881 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 TMEM240Q5SV17 173 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 TMEM39AQ9NV64 488 aa16.84■□□□□ 0.29
SSRP1-203ENST00000526696 HERC5Q9UII4 1024 aaKnown RBP16.84■□□□□ 0.29
SSRP1-203ENST00000526696 GPR37L1O60883 481 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 GDF11O95390 407 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 CCNA1P78396 465 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 CCDC102BQ68D86 513 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 SLF2Q8IX21 1173 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
SSRP1-203ENST00000526696 ZNF236Q9UL36 1845 aa16.83■□□□□ 0.28
SSRP1-203ENST00000526696 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
SSRP1-203ENST00000526696 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
SSRP1-203ENST00000526696 COBLO75128 1261 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 ADORA2AP29274 412 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 MRE11P49959 708 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
SSRP1-203ENST00000526696 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
SSRP1-203ENST00000526696 ZNFX1Q9P2E3 1918 aaKnown RBP16.8■□□□□ 0.28
SSRP1-203ENST00000526696 WDFY4Q6ZS81 3184 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 A0A1W2PQ45 241 aaPredicted RBP16.8■□□□□ 0.28
SSRP1-203ENST00000526696 A0A1W2PQY0 241 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 TIMP1P01033 207 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 CATSPERGQ6ZRH7 1159 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
SSRP1-203ENST00000526696 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 TBX21Q9UL17 535 aa16.8■□□□□ 0.28
SSRP1-203ENST00000526696 PDS5AQ29RF7 1337 aaKnown RBP16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L15C9J2P7 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L13C9JLJ4 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L11C9JVI0 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L18D6R9N7 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L22D6RA61 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L17D6RBQ6 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L19D6RCP7 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L20D6RJB6 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 ERC2O15083 957 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 USP17L24Q0WX57 530 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
SSRP1-203ENST00000526696 DPP9Q86TI2 863 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 NSUN4Q96CB9 384 aaKnown RBP16.79■□□□□ 0.28
SSRP1-203ENST00000526696 C12orf42Q96LP6 360 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 SIL1Q9H173 461 aa16.79■□□□□ 0.28
SSRP1-203ENST00000526696 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
SSRP1-203ENST00000526696 TLL1O43897 1013 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 PGK1P00558 417 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 ACRP10323 421 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 SPTY2D1Q68D10 685 aaPredicted RBP16.78■□□□□ 0.28
SSRP1-203ENST00000526696 MFSD5Q6N075 450 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 SH3RF3Q8TEJ3 882 aaPredicted RBP16.78■□□□□ 0.28
SSRP1-203ENST00000526696 TOX2Q96NM4 488 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 TSPYL2Q9H2G4 693 aaPredicted RBP16.78■□□□□ 0.28
SSRP1-203ENST00000526696 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
SSRP1-203ENST00000526696 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
SSRP1-203ENST00000526696 CSF2RAP15509 400 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms