RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZNF76P36508 570 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 CPSF6Q16630 551 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP48-211ENST00000526044 DUSP27Q5VZP5 1158 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 OGFOD3Q6PK18 319 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 BNC2Q6ZN30 1099 aaPredicted RBP6.66□□□□□ -1.34
USP48-211ENST00000526044 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 GATAD2BQ8WXI9 593 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 WNT10AQ9GZT5 417 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
USP48-211ENST00000526044 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
USP48-211ENST00000526044 FAM221AA4D161 298 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 CILPO75339 1184 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 BPNT1O95861 308 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 F13A1P00488 732 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 ETF1P62495 437 aaKnown RBP6.65□□□□□ -1.34
USP48-211ENST00000526044 FAM160A1Q05DH4 1040 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 CDK5R2Q13319 367 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 SNAP47Q5SQN1 464 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 PIM2Q9P1W9 311 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 ANGEL1Q9UNK9 670 aaKnown RBP6.65□□□□□ -1.34
USP48-211ENST00000526044 LEMD3Q9Y2U8 911 aa6.65□□□□□ -1.34
USP48-211ENST00000526044 CCNB3Q8WWL7 1395 aa6.65□□□□□ -1.35
USP48-211ENST00000526044 NCOA2Q15596 1464 aa6.65□□□□□ -1.35
USP48-211ENST00000526044 KIF14Q15058 1648 aa6.65□□□□□ -1.35
USP48-211ENST00000526044 UNCXA6NJT0 531 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 FAM170BA6NMN3 283 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 SCAMP3O14828 347 aaKnown RBP6.64□□□□□ -1.35
USP48-211ENST00000526044 RECKO95980 971 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 EIF4A3P38919 411 aaKnown RBP6.64□□□□□ -1.35
USP48-211ENST00000526044 FANCCQ00597 558 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 CYP27C1Q4G0S4 372 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 EFCAB2Q5VUJ9 269 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 NPM2Q86SE8 214 aaKnown RBP6.64□□□□□ -1.35
USP48-211ENST00000526044 HID1Q8IV36 788 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 RNF34Q969K3 372 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
USP48-211ENST00000526044 CFDP1Q9UEE9 299 aaPredicted RBP6.64□□□□□ -1.35
USP48-211ENST00000526044 ABCC10Q5T3U5 1492 aa6.64□□□□□ -1.35
USP48-211ENST00000526044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP48-211ENST00000526044 GARTP22102 1010 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 GRK4P32298 578 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 PDE4BQ07343 736 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 FBXL19Q6PCT2 694 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 CD109Q6YHK3 1445 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 FAM196AQ6ZSG2 479 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 ZNF765Q7L2R6 523 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 ASIC4Q96FT7 647 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 ROBO2Q9HCK4 1378 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 KCNQ5Q9NR82 932 aa6.63□□□□□ -1.35
USP48-211ENST00000526044 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
USP48-211ENST00000526044 ABCA9Q8IUA7 1624 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 GLI2P10070 1586 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 GPATCH8Q9UKJ3 1502 aaKnown RBP6.62□□□□□ -1.35
USP48-211ENST00000526044 PLCH2O75038 1416 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 PHLDB1Q86UU1 1377 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 GREM1O60565 184 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 FAM87AP0C7U9 286 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 FOSL1P15407 271 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 JAG1P78504 1218 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 UBE3DQ7Z6J8 389 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 ZNF296Q8WUU4 475 aaPredicted RBP6.62□□□□□ -1.35
USP48-211ENST00000526044 DUSP23Q9BVJ7 150 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 TSPOAP1O95153 1857 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 KIF13AQ9H1H9 1805 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 CDC42BPAQ5VT25 1732 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 MYO5CQ9NQX4 1742 aa6.62□□□□□ -1.35
USP48-211ENST00000526044 CYP26A1O43174 497 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 LRIG2O94898 1065 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 PGRP06401 933 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 CAP2P40123 477 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 MPP2Q14168 576 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
USP48-211ENST00000526044 SLBPQ14493 270 aaKnown RBP eCLIP6.61□□□□□ -1.353e-8■■■■■ 73
USP48-211ENST00000526044 OGFOD2Q6N063 350 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 ARMCX6Q7L4S7 300 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 USP48Q86UV5 1035 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 FBRSQ9HAH7 460 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 PRDM10Q9NQV6 1147 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 ADAMTS1Q9UHI8 967 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 DIP2BQ9P265 1576 aa6.61□□□□□ -1.35
USP48-211ENST00000526044 MYOM3Q5VTT5 1437 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 MIA2Q96PC5 1412 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 CDC42BPBQ9Y5S2 1711 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 LEFTY1O75610 366 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 HNRNPMP52272 730 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP48-211ENST00000526044 NKG7Q16617 165 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 ABI1Q8IZP0 508 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 TOP6BLQ8N6T0 577 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 MFSD2AQ8NA29 543 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 ITSN2Q9NZM3 1697 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 TTC37Q6PGP7 1564 aa6.6□□□□□ -1.35
USP48-211ENST00000526044 ZNF644Q9H582 1327 aaPredicted RBP6.59□□□□□ -1.35
USP48-211ENST00000526044 MAP3K4Q9Y6R4 1608 aa6.59□□□□□ -1.35
USP48-211ENST00000526044 PLCG1P19174 1290 aa6.59□□□□□ -1.35
USP48-211ENST00000526044 HOXA10P31260 410 aaPredicted RBP6.59□□□□□ -1.35
USP48-211ENST00000526044 CWF19L2Q2TBE0 894 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms