RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MGAMO43451 1857 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 RGS19P49795 217 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 CHD1LQ86WJ1 897 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 SH3TC2Q8TF17 1288 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 EPB41L4AQ9HCS5 686 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 SRRDQ9UH36 339 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 GABRQQ9UN88 632 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 MYH8P13535 1937 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 MYPNQ86TC9 1320 aa15.4■□□□□ 0.06
TRAPPC4-205ENST00000525079 A0A1W2PRG0 241 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 GNRH1P01148 92 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 HOXD10P28358 340 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 HOXA7P31268 230 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 NUCB1Q02818 461 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 PRKCZQ05513 592 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 CCDC129Q6ZRS4 1044 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 C16orf86Q6ZW13 317 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 EVI5LQ96CN4 794 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 KIAA1683Q9H0B3 1180 aa15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-205ENST00000525079 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 TNPO2O14787 897 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 GNAT2P19087 354 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 TDO2P48775 406 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 PRMT2P55345 433 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 HERVK_113P62684 666 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 MLLT1Q03111 559 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 SBK1Q52WX2 424 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 TMEM179Q6ZVK1 233 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 IFNL3Q8IZI9 196 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 RAET1EQ8TD07 263 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 ARMC5Q96C12 935 aa15.38■□□□□ 0.05
TRAPPC4-205ENST00000525079 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP14P54578 494 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 SIAH1Q8IUQ4 282 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 C12orf42Q96LP6 360 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 CCDC17Q96LX7 622 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 PAGR1Q9BTK6 254 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 TXNRD2Q9NNW7 524 aa15.37■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 VCAM1P19320 739 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 ATP2B2Q01814 1243 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 NBPF11Q86T75 865 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 RPAP3Q9H6T3 665 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 RBPJLQ9UBG7 517 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 TAOK2Q9UL54 1235 aa15.36■□□□□ 0.05
TRAPPC4-205ENST00000525079 RASA1P20936 1047 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 FLT3LGP49771 235 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 ICA1Q05084 483 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 Q3C1V9 767 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 CATSPERGQ6ZRH7 1159 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 GPRC5AQ8NFJ5 357 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 FAM227BQ96M60 508 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 ARHGEF10LQ9HCE6 1279 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
TRAPPC4-205ENST00000525079 PRDM1O75626 825 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 EEF2P13639 858 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 GRK4P32298 578 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 COA7Q96BR5 231 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 NAPBQ9H115 298 aa15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 BIN2Q9UBW5 565 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-205ENST00000525079 A0A0D9SFI3 127 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 FOXP2O15409 715 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 ADCY3O60266 1144 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 ELNP15502 786 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 EN2P19622 333 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 MTFR1Q15390 333 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
TRAPPC4-205ENST00000525079 RAD21O60216 631 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 CNMDO75829 334 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms