RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 MORF4L1Q9UBU8 362 aa13.43□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L12C9JPN9 530 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L21D6R901 530 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 SMIM22K7EJ46 135 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP14P54578 494 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 AMOTL1Q8IY63 956 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 RLFQ13129 1914 aa13.42□□□□□ -0.26
TRAPPC4-204ENST00000524797 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 M0R2C6 588 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 GRK4P32298 578 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 HERVK_113P62684 666 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 MYCP01106 439 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 AKR1B1P15121 316 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 EN2P19622 333 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 CDK8P49336 464 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 FLT3LGP49771 235 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 LRRFIP1Q32MZ4 808 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 TMEM179Q6ZVK1 233 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 C16orf86Q6ZW13 317 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 COA7Q96BR5 231 aa13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 ARPP21Q9UBL0 812 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-204ENST00000524797 A0A0G2JMZ2 1700 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L15C9J2P7 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 GPAA1O43292 621 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 IRF5Q13568 498 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 SLAIN1Q8ND83 568 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 FSD1Q9BTV5 496 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 TXNRD2Q9NNW7 524 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
TRAPPC4-204ENST00000524797 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 ADCY3O60266 1144 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 PEX10O60683 326 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 VCAM1P19320 739 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 MTFR1Q15390 333 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 RBPJLQ9UBG7 517 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-204ENST00000524797 ROBO3Q96MS0 1386 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 ELNP15502 786 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 GNAT2P19087 354 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 PDE1AP54750 535 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 UBXN2AP68543 259 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 SMC5Q8IY18 1101 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 TNRC18O15417 2968 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-204ENST00000524797 HTTP42858 3142 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 CNMDO75829 334 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 CCL5P13501 91 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 ERVK-24P63145 666 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 ICA1Q05084 483 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 ARHGEF10LQ9HCE6 1279 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 GJD2Q9UKL4 321 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 COL11A1P12107 1806 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 MINDY4BA8MYZ0 360 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 PATL2C9JE40 543 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 IGHDP01880 384 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 Q3C1V9 767 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 KIAA1755Q5JYT7 1200 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 RABGAP1Q9Y3P9 1069 aa13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-204ENST00000524797 INHAP05111 366 aa13.36□□□□□ -0.27
TRAPPC4-204ENST00000524797 TDO2P48775 406 aa13.36□□□□□ -0.27
TRAPPC4-204ENST00000524797 LBX2Q6XYB7 198 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms