RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
CTSB-207ENST00000524654 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 PTPRFP10586 1907 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 NAV1Q8NEY1 1877 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
CTSB-207ENST00000524654 AKR1B1P15121 316 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 GNAT2P19087 354 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 HERVK_113P62684 666 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
CTSB-207ENST00000524654 NUCB1Q02818 461 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 PRKCZQ05513 592 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 ZYXQ15942 572 aaKnown RBP13.17□□□□□ -0.3
CTSB-207ENST00000524654 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 SIAH1Q8IUQ4 282 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
CTSB-207ENST00000524654 FEZ1Q99689 392 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
CTSB-207ENST00000524654 GABRQQ9UN88 632 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
CTSB-207ENST00000524654 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 MYH1P12882 1939 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
CTSB-207ENST00000524654 TNPO2O14787 897 aaKnown RBP13.16□□□□□ -0.3
CTSB-207ENST00000524654 VCAM1P19320 739 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 SH3TC2Q8TF17 1288 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 TXNRD2Q9NNW7 524 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 ROBO3Q96MS0 1386 aa13.16□□□□□ -0.3
CTSB-207ENST00000524654 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 PEX10O60683 326 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 FLT3LGP49771 235 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
CTSB-207ENST00000524654 CENPFP49454 3210 aa13.15□□□□□ -0.31
CTSB-207ENST00000524654 FOXP2O15409 715 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 APPP05067 770 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 GRK4P32298 578 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 IRF5Q13568 498 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 LBX2Q6XYB7 198 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 CLEC10AQ8IUN9 316 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
CTSB-207ENST00000524654 COA7Q96BR5 231 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTSB-207ENST00000524654 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
CTSB-207ENST00000524654 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 RASA1P20936 1047 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 TDO2P48775 406 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 ICA1Q05084 483 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 Q3C1V9 767 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
CTSB-207ENST00000524654 KANSL2Q9H9L4 492 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 GJD2Q9UKL4 321 aa13.13□□□□□ -0.31
CTSB-207ENST00000524654 TNRC18O15417 2968 aaPredicted RBP13.12□□□□□ -0.31
CTSB-207ENST00000524654 ADCY3O60266 1144 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 CNMDO75829 334 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
CTSB-207ENST00000524654 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
CTSB-207ENST00000524654 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
CTSB-207ENST00000524654 ERVK-9P63128 1117 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 ERVK-24P63145 666 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 MTFR1Q15390 333 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 LPAR1Q92633 364 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 HELLSQ9NRZ9 838 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
CTSB-207ENST00000524654 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
CTSB-207ENST00000524654 ELNP15502 786 aa13.11□□□□□ -0.31
CTSB-207ENST00000524654 MAPK4P31152 587 aa13.11□□□□□ -0.31
CTSB-207ENST00000524654 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
CTSB-207ENST00000524654 CCDC129Q6ZRS4 1044 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms