RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GDNFP39905 211 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 TNK2Q07912 1038 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 TMPRSS7Q7RTY8 843 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 PHC3Q8NDX5 983 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 CRELD1Q96HD1 420 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 FAM84AQ96KN4 292 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 ALPK1Q96QP1 1244 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 DPH2Q9BQC3 489 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-208ENST00000524652 C19orf73Q9NVV2 129 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.15□□□□□ -1.597e-7■□□□□ 9.9
CSDE1-208ENST00000524652 USP31Q70CQ4 1352 aa5.15□□□□□ -1.59
CSDE1-208ENST00000524652 LAMC3Q9Y6N6 1575 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 XPCQ01831 940 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-208ENST00000524652 MESP2Q0VG99 397 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 CDH24Q86UP0 819 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 DNAJB8Q8NHS0 232 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 UBE2FQ969M7 185 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 ACSF2Q96CM8 615 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-208ENST00000524652 KIRREL1Q96J84 757 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 TLR6Q9Y2C9 796 aa5.14□□□□□ -1.59
CSDE1-208ENST00000524652 CUX2O14529 1486 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-208ENST00000524652 BPNT1O95861 308 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 CTSHP09668 335 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 ITGAEP38570 1179 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 ZNF124Q15973 351 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 FYB2Q5VWT5 728 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 FBXO33Q7Z6M2 555 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 AEBP1Q8IUX7 1158 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 CYB5D2Q8WUJ1 264 aa5.13□□□□□ -1.59
CSDE1-208ENST00000524652 CILPO75339 1184 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 PDIA4P13667 645 aaKnown RBP5.12□□□□□ -1.59
CSDE1-208ENST00000524652 YARSP54577 528 aaKnown RBP5.12□□□□□ -1.59
CSDE1-208ENST00000524652 LMNB2Q03252 620 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 MLANAQ16655 118 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 TMEM67Q5HYA8 995 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 MPZL3Q6UWV2 235 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 SLFN12Q8IYM2 578 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 GATAD2BQ8WXI9 593 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 JARID2Q92833 1246 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-208ENST00000524652 RHOVQ96L33 236 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 Q96M66 194 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 PPP1R16BQ96T49 567 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
CSDE1-208ENST00000524652 ZSWIM5Q9P217 1185 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 CEP131Q9UPN4 1083 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 CFTRP13569 1480 aa5.12□□□□□ -1.59
CSDE1-208ENST00000524652 FAM221AA4D161 298 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 SORBS3O60504 671 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 TSPAN15O95858 294 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 ESR1P03372 595 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 PLCG1P19174 1290 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 ERCC3P19447 782 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 CAMK2GQ13555 558 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-208ENST00000524652 PWP1Q13610 501 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 PPP1R13LQ8WUF5 828 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 LIN37Q96GY3 246 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-208ENST00000524652 GPR62Q9BZJ7 368 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 TMEM59LQ9UK28 342 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 CORINQ9Y5Q5 1042 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 PRR36Q9H6K5 1346 aa5.11□□□□□ -1.59
CSDE1-208ENST00000524652 SRFP11831 508 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 RAC2P15153 192 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 BNC2Q6ZN30 1099 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-208ENST00000524652 DTWD2Q8NBA8 298 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 FAM13CQ8NE31 585 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 THOC2Q8NI27 1593 aaKnown RBP5.1□□□□□ -1.59
CSDE1-208ENST00000524652 RNF141Q8WVD5 230 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 FAM161BQ96MY7 647 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 MRS2Q9HD23 443 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 GPATCH2Q9NW75 528 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 SLAMF8Q9P0V8 285 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 KCNH3Q9ULD8 1083 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 CADPSQ9ULU8 1353 aa5.1□□□□□ -1.59
CSDE1-208ENST00000524652 F13A1P00488 732 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 TPP2P29144 1249 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-208ENST00000524652 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 PRR23BQ6ZRT6 265 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 TTC6Q86TZ1 520 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 TMEM74Q96NL1 305 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 RSRP1Q9BUV0 290 aa5.09□□□□□ -1.59
CSDE1-208ENST00000524652 DUSP15Q9H1R2 295 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-208ENST00000524652 DNAJC25-GNG10A0A024R161 153 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 PF4P02776 101 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 HPXP02790 462 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 RAP1GAPP47736 663 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 MPP2Q14168 576 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 RALGPS1Q5JS13 557 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 TSPYL5Q86VY4 417 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-208ENST00000524652 CREG2Q8IUH2 290 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 FBXO15Q8NCQ5 510 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-208ENST00000524652 ABHD4Q8TB40 342 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 ASPNQ9BXN1 380 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 REV1Q9UBZ9 1251 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 VTI1BQ9UEU0 232 aa5.08□□□□□ -1.6
CSDE1-208ENST00000524652 DUSP13Q9UII6 198 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms