RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SIPA1L1O43166 1804 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 TRIOBPQ9H2D6 2365 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 PDE6AP16499 860 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 CYP2B6P20813 491 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 MAP3K21Q5TCX8 1036 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 CATSPERGQ6ZRH7 1159 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 CWC22Q9HCG8 908 aaKnown RBP14.34□□□□□ -0.11
SPARC-206ENST00000524277 TXNRD2Q9NNW7 524 aa14.34□□□□□ -0.11
SPARC-206ENST00000524277 GABPAQ06546 454 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 Q3C1V9 767 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 MORN1Q5T089 497 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 USP6NLQ92738 828 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 PAWRQ96IZ0 340 aaKnown RBP14.33□□□□□ -0.12
SPARC-206ENST00000524277 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
SPARC-206ENST00000524277 NBPF3Q9H094 633 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 MCM9Q9NXL9 1143 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 SWAP70Q9UH65 585 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.12
SPARC-206ENST00000524277 MYH1P12882 1939 aa14.33□□□□□ -0.12
SPARC-206ENST00000524277 GOLIM4O00461 696 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
SPARC-206ENST00000524277 SHMT1P34896 483 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 PLCD1P51178 756 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
SPARC-206ENST00000524277 TRIB2Q92519 343 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 APBA2Q99767 749 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 PAGR1Q9BTK6 254 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 PRO3102Q9H379 93 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 HOXC10Q9NYD6 342 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
SPARC-206ENST00000524277 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
SPARC-206ENST00000524277 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
SPARC-206ENST00000524277 ATP5JP18859 108 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 VCAM1P19320 739 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 EDC3Q96F86 508 aaKnown RBP14.31□□□□□ -0.12
SPARC-206ENST00000524277 DNAJC2Q99543 621 aaKnown RBP14.31□□□□□ -0.12
SPARC-206ENST00000524277 PORCNQ9H237 461 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
SPARC-206ENST00000524277 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
SPARC-206ENST00000524277 TCRBV5S4A2TA0A5A2 114 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 SLC15A5A6NIM6 579 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 ZYXQ15942 572 aaKnown RBP14.3□□□□□ -0.12
SPARC-206ENST00000524277 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 TMEM179Q6ZVK1 233 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 DDRGK1Q96HY6 314 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 IVNS1ABPQ9Y6Y0 642 aa14.3□□□□□ -0.12
SPARC-206ENST00000524277 APBB1O00213 710 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 STRNO43815 780 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 HOXC6P09630 235 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 PTPREP23469 700 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 CACNB2Q08289 660 aaPredicted RBP14.29□□□□□ -0.12
SPARC-206ENST00000524277 TRIM32Q13049 653 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 COG2Q14746 738 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 LPAR1Q92633 364 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 HAUS7Q99871 368 aa14.29□□□□□ -0.12
SPARC-206ENST00000524277 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
SPARC-206ENST00000524277 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
SPARC-206ENST00000524277 MPHOSPH10O00566 681 aaKnown RBP14.28□□□□□ -0.12
SPARC-206ENST00000524277 MSCO60682 206 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 CNMDO75829 334 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 BMP8BP34820 402 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 ADD2P35612 726 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 SEPT2Q15019 361 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 POTEEQ6S8J3 1075 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 LCORLQ8N3X6 602 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 DIS3LQ8TF46 1054 aaKnown RBP14.28□□□□□ -0.12
SPARC-206ENST00000524277 LRRCC1Q9C099 1032 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 BOLA2Q9H3K6 86 aa14.28□□□□□ -0.12
SPARC-206ENST00000524277 RANBP2P49792 3224 aaKnown RBP14.27□□□□□ -0.12
SPARC-206ENST00000524277 PEX10O60683 326 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
SPARC-206ENST00000524277 ATP2B2Q01814 1243 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 GRB14Q14449 540 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 WDR78Q5VTH9 848 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 SHCBP1Q8NEM2 672 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 SDR42E1Q8WUS8 393 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 ARHGEF10LQ9HCE6 1279 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 PLXNB2O15031 1838 aa14.27□□□□□ -0.13
SPARC-206ENST00000524277 MBD4O95243 580 aa14.26□□□□□ -0.13
SPARC-206ENST00000524277 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms