RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 ZNF532Q9HCE3 1301 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 COL18A1P39060 1754 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 PCCAP05165 728 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 XBP1P17861 261 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 NAPBQ9H115 298 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 MYH6P13533 1939 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 ERICH2A1L162 156 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 TRIM75PA6NK02 468 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 A1BGP04217 495 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 CSF1RP07333 972 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 PDE6AP16499 860 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPIDR-225ENST00000524141 TCIRG1Q13488 830 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 STRBPQ96SI9 672 aaKnown RBP11.61□□□□□ -0.55
SPIDR-225ENST00000524141 SUGCTQ9HAC7 445 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 A0A0U1RQJ8 604 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 LRRC10BA6NIK2 292 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 AMPD2Q01433 879 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 DPYDQ12882 1025 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 NR5A1Q13285 461 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 CRACR2BQ8N4Y2 399 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-225ENST00000524141 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 PPM1EQ8WY54 764 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 RPGRIP1Q96KN7 1286 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
SPIDR-225ENST00000524141 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
SPIDR-225ENST00000524141 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 N4BP3O15049 544 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 UQCRFS1P1P0C7P4 283 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 NOP2P46087 812 aaKnown RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 STX17P56962 302 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 WTAPQ15007 396 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 MFSD6Q6ZSS7 791 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 SEC31BQ9NQW1 1179 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 RIPOR2Q9Y4F9 1068 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 ADAMTSL3P82987 1691 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 KCPQ6ZWJ8 1503 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 ARHGAP25P42331 645 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 AFMP43652 599 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 ERVK-24P63145 666 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 TTC31Q49AM3 519 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 LDHAL6AQ6ZMR3 332 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 USP49Q70CQ1 688 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 AFAP1L1Q8TED9 768 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 FAM107BQ9H098 131 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
SPIDR-225ENST00000524141 PIH1D3Q9NQM4 214 aaKnown RBP11.6□□□□□ -0.55
SPIDR-225ENST00000524141 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 ERVV-2B6SEH9 535 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 RNF40O75150 1001 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 PPFIA4O75335 1185 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 IFNL3Q8IZI9 196 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 NOA1Q8NC60 698 aaKnown RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 PAPPAQ13219 1627 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 PSMD14O00487 310 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 ARID4AP29374 1257 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 CORO7P57737 925 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 KRT31Q15323 416 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 LRRC31Q6UY01 552 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 TRAPPC11Q7Z392 1133 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 RNF26Q9BY78 433 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-225ENST00000524141 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
SPIDR-225ENST00000524141 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 PHACTR2O75167 634 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 CCT6AP40227 531 aaKnown RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 USP14P54578 494 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 STAG1Q8WVM7 1258 aa11.58□□□□□ -0.56
SPIDR-225ENST00000524141 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
SPIDR-225ENST00000524141 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms