RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
HDAC9-228ENST00000524023 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 CDCA7Q9BWT1 371 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-228ENST00000524023 BRIP1Q9BX63 1249 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 SAMSN1Q9NSI8 373 aaKnown RBP12.64□□□□□ -0.39
HDAC9-228ENST00000524023 FAM53CQ9NYF3 392 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 VWA3AA6NCI4 1184 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 PRDM1O75626 825 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 NR1I3Q14994 352 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 DHX58Q96C10 678 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
HDAC9-228ENST00000524023 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
HDAC9-228ENST00000524023 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-228ENST00000524023 FGRP09769 529 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 SLFN14P0C7P3 912 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 ADKP55263 362 aaKnown RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 TROAPQ12815 778 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CASZ1Q86V15 1759 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 COL22A1Q8NFW1 1626 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 A0A1B0GTH6 734 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CALM1P0DP23 149 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CALM2P0DP24 149 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CALM3P0DP25 149 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 CAVIN4Q5BKX8 364 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 SRRTQ9BXP5 876 aaKnown RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-228ENST00000524023 ZNF446Q9NWS9 450 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
HDAC9-228ENST00000524023 GOLGA6L9A6NEM1 432 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 WNT7AO00755 349 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 BMP15O95972 392 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 AFMP43652 599 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 GABPB1Q06547 395 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 NPY5RQ15761 445 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 CTR9Q6PD62 1173 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 TNFRSF25Q93038 417 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 DDAH1O94760 285 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 CUL4BQ13620 913 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 SPATA1Q5VX52 437 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 TMTC3Q6ZXV5 915 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-228ENST00000524023 MINPP1Q9UNW1 487 aa12.62□□□□□ -0.39
HDAC9-228ENST00000524023 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 MYH13Q9UKX3 1938 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
HDAC9-228ENST00000524023 CASP1P29466 404 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 DPYDQ12882 1025 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 ZNF174Q15697 407 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
HDAC9-228ENST00000524023 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-228ENST00000524023 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
HDAC9-228ENST00000524023 BAZ2BQ9UIF8 2168 aaKnown RBP12.61□□□□□ -0.39
HDAC9-228ENST00000524023 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
HDAC9-228ENST00000524023 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 USP17L21D6R901 530 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 TEX33O43247 280 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 TADA3O75528 432 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 CLCN6P51797 869 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 TTC38Q5R3I4 469 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 MNS1Q8NEH6 495 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 UBXN4Q92575 508 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 GSDMAQ96QA5 445 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC9-228ENST00000524023 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
HDAC9-228ENST00000524023 IGSF3O75054 1194 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 KIF20AO95235 890 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 STX17P56962 302 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 GNG11P61952 73 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 KLHL10Q6JEL2 608 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
HDAC9-228ENST00000524023 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
HDAC9-228ENST00000524023 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms