RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	ZKSCAN1	P17029	563 aa	Predicted RBP	18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	CYP2B6	P20813	491 aa		18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	TXNRD2	Q9NNW7	524 aa		18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	PAG1	Q9NWQ8	432 aa		18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	GJD2	Q9UKL4	321 aa		18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	RPTOR	Q8N122	1335 aa		18.94	■□□□□ 0.62
CDK16-222	ENST00000523699	MPHOSPH10	O00566	681 aa	Known RBP	18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	GLRX3	O76003	335 aa	Known RBP	18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	SHMT1	P34896	483 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	RGS2	P41220	211 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	PLCD1	P51178	756 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	CHRDL2	Q6WN34	429 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	SIRT2	Q8IXJ6	389 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	ANKLE1	Q8NAG6	615 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	DDRGK1	Q96HY6	314 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	CRISPLD2	Q9H0B8	497 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	RBPJL	Q9UBG7	517 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	RABGAP1	Q9Y3P9	1069 aa		18.93	■□□□□ 0.62
CDK16-222	ENST00000523699	EVI5	O60447	810 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	XRCC5	P13010	732 aa	Known RBP	18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	VCAM1	P19320	739 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	NECAB2	Q7Z6G3	386 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	PLEKHH3	Q7Z736	793 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	LCORL	Q8N3X6	602 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	TRIB2	Q92519	343 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	SWAP70	Q9UH65	585 aa		18.92	■□□□□ 0.62
CDK16-222	ENST00000523699	ATP5J	P18859	108 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	GPR142	Q7Z601	462 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	SDR42E1	Q8WUS8	393 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	APBA2	Q99767	749 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	LRRCC1	Q9C099	1032 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	BOLA2	Q9H3K6	86 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	ARMT1	Q9H993	441 aa		18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.91	■□□□□ 0.62
CDK16-222	ENST00000523699	CDK5RAP2	Q96SN8	1893 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	TCRBV5S4A2T	A0A5A2	114 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	MBD4	O95243	580 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	PRKAR2A	P13861	404 aa	Known RBP	18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	FXR1	P51114	621 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	GABPA	Q06546	454 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	WDR78	Q5VTH9	848 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	ZSCAN25	Q6NSZ9	544 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	ACER1	Q8TDN7	264 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	PAWR	Q96IZ0	340 aa	Known RBP	18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	PORCN	Q9H237	461 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	SH2D4A	Q9H788	454 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	ATP8A2	Q9NTI2	1148 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	IVNS1ABP	Q9Y6Y0	642 aa		18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	DDX60L	Q5H9U9	1706 aa	Known RBP	18.9	■□□□□ 0.62
CDK16-222	ENST00000523699	PEX10	O60683	326 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	ADD2	P35612	726 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	SEPT2	Q15019	361 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	CATSPERG	Q6ZRH7	1159 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	TMEM179	Q6ZVK1	233 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	EDC3	Q96F86	508 aa	Known RBP	18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	HAUS7	Q99871	368 aa		18.89	■□□□□ 0.61
CDK16-222	ENST00000523699	NAV1	Q8NEY1	1877 aa		18.88	■□□□□ 0.61
CDK16-222	ENST00000523699	TRIM32	Q13049	653 aa		18.88	■□□□□ 0.61
CDK16-222	ENST00000523699	GPATCH3	Q96I76	525 aa		18.88	■□□□□ 0.61
CDK16-222	ENST00000523699	TANGO6	Q9C0B7	1094 aa		18.88	■□□□□ 0.61
CDK16-222	ENST00000523699	NBPF3	Q9H094	633 aa		18.88	■□□□□ 0.61
CDK16-222	ENST00000523699	MAP2K5	Q13163	448 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	UBE3C	Q15386	1083 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699		Q3C1V9	767 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	MORN1	Q5T089	497 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	MAP3K21	Q5TCX8	1036 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	LBX2	Q6XYB7	198 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	ARHGEF10L	Q9HCE6	1279 aa		18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.87	■□□□□ 0.61
CDK16-222	ENST00000523699	MYH1	P12882	1939 aa		18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	CYP2D6	P10635	497 aa		18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	GUCY1A2	P33402	732 aa		18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	DIS3L	Q8TF46	1054 aa	Known RBP	18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	USP6NL	Q92738	828 aa		18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	C11orf49	Q9H6J7	331 aa		18.86	■□□□□ 0.61
CDK16-222	ENST00000523699	SLC15A5	A6NIM6	579 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	CNMD	O75829	334 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	ICA1	Q05084	483 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	MFSD14C	Q5VZR4	134 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	SLC44A5	Q8NCS7	719 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	LPAR1	Q92633	364 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	CCDC17	Q96LX7	622 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	HOXC10	Q9NYD6	342 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	RBM27	Q9P2N5	1060 aa	Known RBP	18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	OGDHL	Q9ULD0	1010 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	SLC4A4	Q9Y6R1	1079 aa		18.85	■□□□□ 0.61
CDK16-222	ENST00000523699	PRKAB2	O43741	272 aa		18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	CACNB2	Q08289	660 aa	Predicted RBP	18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	COG2	Q14746	738 aa		18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	C20orf194	Q5TEA3	1177 aa		18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	DYNLL2	Q96FJ2	89 aa		18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	ECHDC1	Q9NTX5	307 aa		18.84	■□□□□ 0.61
CDK16-222	ENST00000523699	PTPRE	P23469	700 aa		18.83	■□□□□ 0.6
CDK16-222	ENST00000523699	EVX2	Q03828	476 aa		18.83	■□□□□ 0.6
CDK16-222	ENST00000523699	CCL14	Q16627	93 aa		18.83	■□□□□ 0.6
CDK16-222	ENST00000523699	C7orf61	Q8IZ16	206 aa		18.83	■□□□□ 0.6
CDK16-222	ENST00000523699	MB21D1	Q8N884	522 aa		18.83	■□□□□ 0.6
CDK16-222	ENST00000523699	BTBD7	Q9P203	1132 aa		18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms