RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	SIAH1	Q8IUQ4	282 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	FAM227B	Q96M60	508 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	GINM1	Q9NU53	330 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555	PTCH2	Q9Y6C5	1203 aa		11.43	□□□□□ -0.58
PABPC1-222	ENST00000523555		A0A0D9SFI3	127 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	MPHOSPH10	O00566	681 aa	Known RBP	11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	OSBP	P22059	807 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	PSMC4	P43686	418 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	VPS53	Q5VIR6	699 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	IFNL3	Q8IZI9	196 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	ANKRD13C	Q8N6S4	541 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	EVI5L	Q96CN4	794 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	SWAP70	Q9UH65	585 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555		A0A0G2JMZ2	1700 aa		11.42	□□□□□ -0.58
PABPC1-222	ENST00000523555	ROBO3	Q96MS0	1386 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	MINDY4B	A8MYZ0	360 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	C19orf81	C9J6K1	198 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	SBK1	Q52WX2	424 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	RILPL2	Q969X0	211 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	P2RX7	Q99572	595 aa	Known RBP	11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	OSBPL3	Q9H4L5	887 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	TXNRD2	Q9NNW7	524 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	CABP5	Q9NP86	173 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	TMOD4	Q9NZQ9	345 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	GABRQ	Q9UN88	632 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	TACC3	Q9Y6A5	838 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	LAMA4	Q16363	1823 aa		11.41	□□□□□ -0.58
PABPC1-222	ENST00000523555	TRIM6-TRIM34	B2RNG4	842 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	PATL2	C9JE40	543 aa	Known RBP	11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	PRDM1	O75626	825 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	APP	P05067	770 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	VCAM1	P19320	739 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	RASA1	P20936	1047 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	HOXA7	P31268	230 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	TDO2	P48775	406 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	NMI	Q13287	307 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	GIMAP6	Q6P9H5	292 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	USP17L2	Q6R6M4	530 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	TMEM179	Q6ZVK1	233 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	SH3TC2	Q8TF17	1288 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	C12orf42	Q96LP6	360 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	FEZ1	Q99689	392 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	KIAA1683	Q9H0B3	1180 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	PNMA3	Q9UL41	463 aa		11.4	□□□□□ -0.58
PABPC1-222	ENST00000523555	CNMD	O75829	334 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	FMNL1	O95466	1100 aa	Predicted RBP	11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	GSPT1	P15170	499 aa	Known RBP	11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	GNAT2	P19087	354 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	HERVK_113	P62684	666 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	PRKCZ	Q05513	592 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	KIF22	Q14807	665 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555		Q3C1V9	767 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	DDRGK1	Q96HY6	314 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	INCENP	Q9NQS7	918 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	SRRD	Q9UH36	339 aa		11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	KIAA0100	Q14667	2235 aa	Known RBP	11.39	□□□□□ -0.59
PABPC1-222	ENST00000523555	MYPN	Q86TC9	1320 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	POTEF	A5A3E0	1075 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	MYC	P01106	439 aa	Predicted RBP	11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	EEF2	P13639	858 aa	Known RBP	11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	IRX3	P78415	501 aa	Predicted RBP	11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	ICA1	Q05084	483 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	CTDSPL2	Q05D32	466 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	1e-323	■■■■□ 22
PABPC1-222	ENST00000523555	FAM110C	Q1W6H9	321 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	CATSPERG	Q6ZRH7	1159 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	SKAP1	Q86WV1	359 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	AMOTL1	Q8IY63	956 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	ARMC5	Q96C12	935 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	IL25	Q9H293	177 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	RBPJL	Q9UBG7	517 aa		11.38	□□□□□ -0.59
PABPC1-222	ENST00000523555	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	SDS	P20132	328 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	RGS19	P49795	217 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP14	P54578	494 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	FCGRT	P55899	365 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	PPARA	Q07869	468 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	SPICE1	Q8N0Z3	855 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	NKX2-3	Q8TAU0	364 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	ZNF333	Q96JL9	665 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	CCDC17	Q96LX7	622 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	PAGR1	Q9BTK6	254 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	NAPB	Q9H115	298 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	HELLS	Q9NRZ9	838 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	MORF4L1	Q9UBU8	362 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	TMX2	Q9Y320	296 aa		11.37	□□□□□ -0.59
PABPC1-222	ENST00000523555	IGKV6D-41	A0A0C4DH26	115 aa		11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP17L15	C9J2P7	530 aa		11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP17L13	C9JLJ4	530 aa		11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP17L11	C9JVI0	530 aa		11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP17L18	D6R9N7	530 aa		11.36	□□□□□ -0.59
PABPC1-222	ENST00000523555	USP17L22	D6RA61	530 aa		11.36	□□□□□ -0.59

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