RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
PCM1-219ENST00000523540 ZNF746Q6NUN9 644 aaPredicted RBP7.5□□□□□ -1.21
PCM1-219ENST00000523540 ACSF2Q96CM8 615 aaPredicted RBP7.5□□□□□ -1.21
PCM1-219ENST00000523540 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
PCM1-219ENST00000523540 FOXQ1Q9C009 403 aa7.5□□□□□ -1.21
PCM1-219ENST00000523540 TJP2Q9UDY2 1190 aa7.5□□□□□ -1.21
PCM1-219ENST00000523540 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
PCM1-219ENST00000523540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
PCM1-219ENST00000523540 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
PCM1-219ENST00000523540 COL9A2Q14055 689 aaPredicted RBP7.49□□□□□ -1.21
PCM1-219ENST00000523540 GK5Q6ZS86 529 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 MCATQ8IVS2 390 aaKnown RBP7.49□□□□□ -1.21
PCM1-219ENST00000523540 SLC43A3Q8NBI5 491 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 C8orf37Q96NL8 207 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 MAPK8IP1Q9UQF2 711 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 EFR3BQ9Y2G0 817 aa7.49□□□□□ -1.21
PCM1-219ENST00000523540 DNAJA2O60884 412 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
PCM1-219ENST00000523540 FBLN7Q53RD9 439 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 CARMIL2Q6F5E8 1435 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 SPOCD1Q6ZMY3 1216 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 ZNF765Q7L2R6 523 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 SEC16BQ96JE7 1060 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 KRTAP4-11Q9BYQ6 195 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
PCM1-219ENST00000523540 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 CDK5R2Q13319 367 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
PCM1-219ENST00000523540 NAALADL2Q58DX5 795 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
PCM1-219ENST00000523540 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 MISP3Q96FF7 219 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 PPT2Q9UMR5 302 aa7.47□□□□□ -1.21
PCM1-219ENST00000523540 SLC22A31A6NKX4 558 aa7.46□□□□□ -1.22
PCM1-219ENST00000523540 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
PCM1-219ENST00000523540 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
PCM1-219ENST00000523540 PRAMEF13Q5VWM6 474 aa7.46□□□□□ -1.22
PCM1-219ENST00000523540 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
PCM1-219ENST00000523540 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
PCM1-219ENST00000523540 DBX1A6NMT0 343 aa7.45□□□□□ -1.22
PCM1-219ENST00000523540 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
PCM1-219ENST00000523540 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
PCM1-219ENST00000523540 YARSP54577 528 aaKnown RBP7.45□□□□□ -1.22
PCM1-219ENST00000523540 VPS37DQ86XT2 251 aa7.45□□□□□ -1.22
PCM1-219ENST00000523540 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
PCM1-219ENST00000523540 GMLQ99445 158 aa7.45□□□□□ -1.22
PCM1-219ENST00000523540 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 IMPDH2P12268 514 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 MLECQ14165 292 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 RBBP8NLQ8NC74 664 aaPredicted RBP7.44□□□□□ -1.22
PCM1-219ENST00000523540 FAM13CQ8NE31 585 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
PCM1-219ENST00000523540 TNKS2Q9H2K2 1166 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 GMIPQ9P107 970 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 KLHL3Q9UH77 587 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
PCM1-219ENST00000523540 LEFTY1O75610 366 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 SLITRK5O94991 958 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 EOMESO95936 686 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
PCM1-219ENST00000523540 ARID5AQ03989 594 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 ZNF124Q15973 351 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
PCM1-219ENST00000523540 ZNF792Q3KQV3 632 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 ZNF574Q6ZN55 896 aaPredicted RBP7.43□□□□□ -1.22
PCM1-219ENST00000523540 CCDC81Q6ZN84 652 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 CYB5D2Q8WUJ1 264 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 FERD3LQ96RJ6 166 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
PCM1-219ENST00000523540 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 FGRP09769 529 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 CYP7A1P22680 504 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 KIR3DL1P43629 444 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 OXCT1P55809 520 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
PCM1-219ENST00000523540 CDCP2Q5VXM1 449 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 OVOS1Q6IE37 1185 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 SPRED2Q7Z698 418 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 NETO1Q8TDF5 533 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 TMEM40Q8WWA1 233 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
PCM1-219ENST00000523540 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
PCM1-219ENST00000523540 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
PCM1-219ENST00000523540 BIN1O00499 593 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 CEACAM5P06731 702 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
PCM1-219ENST00000523540 CCNFP41002 786 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 ETV3P41162 512 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 GIPRP48546 466 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 CLCN7P51798 805 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 ARSHQ5FYA8 562 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms