RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 PPM1GO15355 546 aaPredicted RBP7□□□□□ -1.29
ARFGEF1-208ENST00000522878 ECE2O60344 883 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 SKIP12755 728 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 SERPINB4P48594 390 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 FLT3LGP49771 235 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 MTHFSP49914 203 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 NR1H3Q13133 447 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 DZIP3Q86Y13 1208 aaKnown RBP7□□□□□ -1.29
ARFGEF1-208ENST00000522878 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 BADQ92934 168 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
ARFGEF1-208ENST00000522878 PBX4Q9BYU1 374 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 SLC12A5Q9H2X9 1139 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 CPA4Q9UI42 421 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 NIP7Q9Y221 180 aaKnown RBP eCLIP7□□□□□ -1.29
ARFGEF1-208ENST00000522878 FANCMQ8IYD8 2048 aa7□□□□□ -1.29
ARFGEF1-208ENST00000522878 KALRNO60229 2985 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 ARAP2Q8WZ64 1704 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 RALGAPA2Q2PPJ7 1873 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L5A8MUK1 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L15C9J2P7 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 BTBD19C9JJ37 291 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L10C9JJH3 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L13C9JLJ4 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L12C9JPN9 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L11C9JVI0 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L21D6R901 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L18D6R9N7 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L22D6RA61 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L17D6RBQ6 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L19D6RCP7 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L20D6RJB6 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 WNT10BO00744 389 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 STARD3NLO95772 234 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 VAMP1P23763 118 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 USP17L24Q0WX57 530 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 PUM1Q14671 1186 aaKnown RBP eCLIP6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 ZNF530Q6P9A1 599 aaPredicted RBP6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 HDGFL2Q7Z4V5 671 aaPredicted RBP6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 AGBL3Q8NEM8 1001 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 ATOH1Q92858 354 aaPredicted RBP6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 HLA-CQ95604 372 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 RBM17Q96I25 401 aaKnown RBP6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 ABCC4O15439 1325 aa6.99□□□□□ -1.29
ARFGEF1-208ENST00000522878 UBR5O95071 2799 aaPredicted RBP6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 RASA1P20936 1047 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 NPAS4Q8IUM7 802 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 SP8Q8IXZ3 490 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 ADSSL1Q8N142 457 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 DLL3Q9NYJ7 618 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 MYO7AQ13402 2215 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 COL12A1Q99715 3063 aa6.98□□□□□ -1.29
ARFGEF1-208ENST00000522878 CEMIPQ8WUJ3 1361 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 NBL1P41271 181 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 GTF2A2P52657 109 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 CRTC2Q53ET0 693 aaPredicted RBP6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 BMP8AQ7Z5Y6 402 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 DEPDC4Q8N2C3 294 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 HNRNPABQ99729 332 aaKnown RBP6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 POLR3GLQ9BT43 218 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 FSD1Q9BTV5 496 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 SLC52A2Q9HAB3 445 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 GAKO14976 1311 aa6.97□□□□□ -1.29
ARFGEF1-208ENST00000522878 PPP1R12BO60237 982 aaPredicted RBP6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 USP2O75604 605 aaPredicted RBP6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 A1BGP04217 495 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 BCRP11274 1271 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 POU3F3P20264 500 aaPredicted RBP6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 FCGRTP55899 365 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 TRIM32Q13049 653 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 ANKRD13AQ8IZ07 590 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 UBXN4Q92575 508 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
ARFGEF1-208ENST00000522878 IBTKQ9P2D0 1353 aaPredicted RBP6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 RELNP78509 3460 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 FAM187AA6NFU0 413 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 ZBBXA8MT70 800 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 GRXCR1A8MXD5 290 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 ATP5J2-PTCD1G3V325 749 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 WDHD1O75717 1129 aaPredicted RBP6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 DGAT1O75907 488 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 FBXO45P0C2W1 286 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 SLC19A1P41440 591 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 RTP1P59025 263 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 PTK7Q13308 1070 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 APOBEC3FQ8IUX4 373 aaKnown RBP6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 SPATA32Q96LK8 384 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 PRKAG2Q9UGJ0 569 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 ZNF652Q9Y2D9 606 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 MTCH2Q9Y6C9 303 aa6.95□□□□□ -1.3
ARFGEF1-208ENST00000522878 H0Y858 1186 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms