RNA–Protein interactions for RNA: ENST00000522163.5

RUNX1T1-240, Transcript of RUNX1 translocation partner 1, human

TSL 5

Gene RUNX1T1, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-240	ENST00000522163	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L15	C9J2P7	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L13	C9JLJ4	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L11	C9JVI0	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L18	D6R9N7	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L22	D6RA61	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L17	D6RBQ6	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L19	D6RCP7	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L20	D6RJB6	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ITGB8	P26012	769 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	EPHB4	P54760	987 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP17L24	Q0WX57	530 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ZYX	Q15942	572 aa	Known RBP	11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	DPP9	Q86TI2	863 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ADAMTS19	Q8TE59	1207 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ARHGAP45	Q92619	1136 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	XAGE2	Q96GT9	111 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ASB2	Q96Q27	587 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	MEIS3	Q99687	375 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	NOL10	Q9BSC4	688 aa	Known RBP	11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ZNF576	Q9H609	170 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TACC3	Q9Y6A5	838 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	LTBP2	Q14767	1821 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	DNAH12	Q6ZR08	3092 aa		11.32	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CDH23	Q9H251	3354 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ATAD5	Q96QE3	1844 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	HOXC6	P09630	235 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CYBA	P13498	195 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	DNAJB2	P25686	324 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TLE2	Q04725	743 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	SNX17	Q15036	470 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	MAPKAPK5	Q8IW41	473 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TGFBRAP1	Q8WUH2	860 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	NEUROD6	Q96NK8	337 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GINM1	Q9NU53	330 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	HMG20B	Q9P0W2	317 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ZBTB21	Q9ULJ3	1066 aa		11.31	□□□□□ -0.6
RUNX1T1-240	ENST00000522163		A0A1B0GUL7	405 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	SEPT4	O43236	478 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GNAI3	P08754	354 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	RAG1	P15918	1043 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	MRPS5	P82675	430 aa	Known RBP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GRB14	Q14449	540 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	MVP	Q14764	893 aa	Known RBP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	LRRC41	Q15345	812 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CCDC85B	Q15834	202 aa	Predicted RBP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	PRAMEF19	Q5SWL8	479 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GORAB	Q5T7V8	394 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CATSPERG	Q6ZRH7	1159 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	SPATA5	Q8NB90	893 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	IL27	Q8NEV9	243 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TIFA	Q96CG3	184 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	UHRF1	Q96T88	793 aa	Predicted RBP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GAS2L1	Q99501	681 aa	Predicted RBP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	DNAJC18	Q9H819	358 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	COPRS	Q9NQ92	184 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	BTBD7	Q9P203	1132 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	LRP2BP	Q9P2M1	347 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	PALD1	Q9ULE6	856 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	AKAP2	Q9Y2D5	859 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	FRMPD3	Q5JV73	1810 aa		11.3	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	MUC3A	Q02505	3323 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	IPO8	O15397	1037 aa	Known RBP	11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	BAG3	O95817	575 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CLTB	P09497	229 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	FPGS	Q05932	587 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TFCP2	Q12800	502 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	C1orf53	Q5VUE5	145 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	PI16	Q6UXB8	463 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	FRAT1	Q92837	279 aa	Predicted RBP	11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	FEZ1	Q99689	392 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	THEG	Q9P2T0	379 aa		11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	SAP30BP	Q9UHR5	308 aa	Known RBP	11.29	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	SRGAP3	O43295	1099 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	BCAR3	O75815	825 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	GH2	P01242	217 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	IGHA2	P01877	340 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TRIM27	P14373	513 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ADORA2A	P29274	412 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	HOXD11	P31277	338 aa	Predicted RBP	11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	USP14	P54578	494 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	RAB3GAP1	Q15042	981 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	OLFML2B	Q68BL8	750 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	ATF7IP	Q6VMQ6	1270 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	CCDC129	Q6ZRS4	1044 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	METTL16	Q86W50	562 aa	Known RBP	11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	C12orf42	Q96LP6	360 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	PRDM12	Q9H4Q4	367 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TMEM39A	Q9NV64	488 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	TNN	Q9UQP3	1299 aa		11.28	□□□□□ -0.6
RUNX1T1-240	ENST00000522163	KIAA0355	O15063	1070 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	STRN	O43815	780 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PQBP1	O60828	265 aa	Known RBP	11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	HLA-DOA	P06340	250 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	IGFBP4	P22692	258 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MTX1	Q13505	466 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms