RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ELP3Q9H9T3 547 aa28.45■■■□□ 2.15
PVT1-212ENST00000521951 TMEM88BA6NKF7 163 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 PTPRAP18433 802 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 UBAC1Q9BSL1 405 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 LRRC2Q9BYS8 371 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 MTMR4Q9NYA4 1195 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 WDR19Q8NEZ3 1342 aa28.44■■■□□ 2.14
PVT1-212ENST00000521951 HUNKP57058 714 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 USP17L5A8MUK1 530 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 IFIT3O14879 490 aaKnown RBP28.43■■■□□ 2.14
PVT1-212ENST00000521951 CCDC178Q5BJE1 867 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 SAPCD2Q86UD0 394 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 SIAH1Q8IUQ4 282 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 IGDCC4Q8TDY8 1250 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 SLC10A4Q96EP9 437 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 MTA3Q9BTC8 594 aa28.43■■■□□ 2.14
PVT1-212ENST00000521951 TNKSO95271 1327 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 NOVP48745 357 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 ICA1Q05084 483 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 SEC23AQ15436 765 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 RCSD1Q6JBY9 416 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 ENAHQ8N8S7 591 aaPredicted RBP28.42■■■□□ 2.14
PVT1-212ENST00000521951 TMEM87BQ96K49 555 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 TLL2Q9Y6L7 1015 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 PHIPQ8WWQ0 1821 aa28.42■■■□□ 2.14
PVT1-212ENST00000521951 SART3Q15020 963 aaKnown RBP28.41■■■□□ 2.14
PVT1-212ENST00000521951 TMEM67Q5HYA8 995 aa28.41■■■□□ 2.14
PVT1-212ENST00000521951 TTC14Q96N46 770 aa28.41■■■□□ 2.14
PVT1-212ENST00000521951 GPHNQ9NQX3 736 aaPredicted RBP28.41■■■□□ 2.14
PVT1-212ENST00000521951 NYAP2Q9P242 653 aa28.41■■■□□ 2.14
PVT1-212ENST00000521951 ZHX2Q9Y6X8 837 aa28.41■■■□□ 2.14
PVT1-212ENST00000521951 MYH4Q9Y623 1939 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 TTLL1O95922 423 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 EEF2P13639 858 aaKnown RBP28.4■■■□□ 2.14
PVT1-212ENST00000521951 APLP1P51693 650 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 NEK4P51957 841 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 RABEP1Q15276 862 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 DGKHQ86XP1 1220 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 ERO1BQ86YB8 467 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 CNKSR2Q8WXI2 1034 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 PDRG1Q9NUG6 133 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 CLIP2Q9UDT6 1046 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 STX8Q9UNK0 236 aa28.4■■■□□ 2.14
PVT1-212ENST00000521951 ERICH2A1L162 156 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 SPDYE5A6NIY4 337 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 SH2B2O14492 632 aaPredicted RBP28.39■■■□□ 2.14
PVT1-212ENST00000521951 ATP2B2Q01814 1243 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 PPP4R3BQ5MIZ7 849 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 Q6ZUG5 572 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 ANKS1AQ92625 1134 aa28.39■■■□□ 2.14
PVT1-212ENST00000521951 WTAPQ15007 396 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 ACER1Q8TDN7 264 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 WDR18Q9BV38 432 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 AS3MTQ9HBK9 375 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 SENP2Q9HC62 589 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 ABT1Q9ULW3 272 aaKnown RBP28.38■■■□□ 2.13
PVT1-212ENST00000521951 A0A1W2PRG0 241 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 PPATQ06203 517 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 MKL1Q969V6 931 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 TBC1D2Q9BYX2 928 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 LY9Q9HBG7 655 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 ARHGEF10LQ9HCE6 1279 aa28.38■■■□□ 2.13
PVT1-212ENST00000521951 IFIT1BQ5T764 474 aaKnown RBP28.37■■■□□ 2.13
PVT1-212ENST00000521951 FBXL16Q8N461 479 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 ZNF280CQ8ND82 737 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 OPTNQ96CV9 577 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 OTUD5Q96G74 571 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 TMEM47Q9BQJ4 181 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 ALDH8A1Q9H2A2 487 aaPredicted RBP28.37■■■□□ 2.13
PVT1-212ENST00000521951 AFG3L2Q9Y4W6 797 aa28.37■■■□□ 2.13
PVT1-212ENST00000521951 LIFRP42702 1097 aa28.36■■■□□ 2.13
PVT1-212ENST00000521951 ECE1P42892 770 aa28.36■■■□□ 2.13
PVT1-212ENST00000521951 FGD1P98174 961 aa28.36■■■□□ 2.13
PVT1-212ENST00000521951 SPP2Q13103 211 aa28.36■■■□□ 2.13
PVT1-212ENST00000521951 AGXT2Q9BYV1 514 aa28.36■■■□□ 2.13
PVT1-212ENST00000521951 TOP1P11387 765 aaKnown RBP28.35■■■□□ 2.13
PVT1-212ENST00000521951 TOB2Q14106 344 aaPredicted RBP28.35■■■□□ 2.13
PVT1-212ENST00000521951 RGMBQ6NW40 437 aa28.35■■■□□ 2.13
PVT1-212ENST00000521951 CREBZFQ9NS37 354 aa28.35■■■□□ 2.13
PVT1-212ENST00000521951 GJA5P36382 358 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 PPIL2Q13356 520 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 TMTC2Q8N394 836 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 BRF1Q92994 677 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 WNK4Q96J92 1243 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 TMX2Q9Y320 296 aa28.34■■■□□ 2.13
PVT1-212ENST00000521951 ZNF157P51786 506 aaPredicted RBP28.33■■■□□ 2.13
PVT1-212ENST00000521951 LRRC47Q8N1G4 583 aaKnown RBP28.33■■■□□ 2.13
PVT1-212ENST00000521951 KAT14Q9H8E8 782 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 TRIM75PA6NK02 468 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 USP17L10C9JJH3 530 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 IRF6O14896 467 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 AK2P54819 239 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 NFXL1Q6ZNB6 911 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 SGMS1Q86VZ5 419 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 HHIPL1Q96JK4 782 aa28.33■■■□□ 2.13
PVT1-212ENST00000521951 BACE1P56817 501 aa28.32■■■□□ 2.12
PVT1-212ENST00000521951 PNMA1Q8ND90 353 aa28.32■■■□□ 2.12
PVT1-212ENST00000521951 FEZ1Q99689 392 aa28.32■■■□□ 2.12
PVT1-212ENST00000521951 KIAA1683Q9H0B3 1180 aa28.32■■■□□ 2.12
PVT1-212ENST00000521951 SH2D4AQ9H788 454 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms