RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 P2RX7Q99572 595 aaKnown RBP21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 KIAA1683Q9H0B3 1180 aa21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 MGAMO43451 1857 aa21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 HOXD10P28358 340 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 IRX3P78415 501 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 MLLT1Q03111 559 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 ZMYM1Q5SVZ6 1142 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 CHD1LQ86WJ1 897 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 C12orf42Q96LP6 360 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 FEZ1Q99689 392 aa21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 ARPP21Q9UBL0 812 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-211ENST00000521700 MYH8P13535 1937 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 AKR1B1P15121 316 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 GNAT2P19087 354 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP14P54578 494 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 NUCB1Q02818 461 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 FAM110CQ1W6H9 321 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 EVI5LQ96CN4 794 aa21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 EPB41L4AQ9HCS5 686 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC9-211ENST00000521700 HTTP42858 3142 aa21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 A0A1W2PRG0 241 aa21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 SLC9C1Q4G0N8 1177 aa21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 MYPNQ86TC9 1320 aa21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 CCDC17Q96LX7 622 aa21.42■■□□□ 1.02
TRAPPC9-211ENST00000521700 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 APPP05067 770 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 HERVK_113P62684 666 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 PRKCZQ05513 592 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 NBPF11Q86T75 865 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 SIAH1Q8IUQ4 282 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 IFNL3Q8IZI9 196 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 SH3TC2Q8TF17 1288 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 ZNF333Q96JL9 665 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 MORF4L1Q9UBU8 362 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 GABRQQ9UN88 632 aa21.41■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L15C9J2P7 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L13C9JLJ4 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L11C9JVI0 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L18D6R9N7 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L22D6RA61 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L17D6RBQ6 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L19D6RCP7 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L20D6RJB6 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 USP17L24Q0WX57 530 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 RAET1EQ8TD07 263 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 RBPJLQ9UBG7 517 aa21.4■■□□□ 1.02
TRAPPC9-211ENST00000521700 TNPO2O14787 897 aaKnown RBP21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 PEX10O60683 326 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 VCAM1P19320 739 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 TDO2P48775 406 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 POTEEQ6S8J3 1075 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 CATSPERGQ6ZRH7 1159 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 CLEC10AQ8IUN9 316 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 STK11IPQ8N1F8 1099 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 TXNRD2Q9NNW7 524 aa21.39■■□□□ 1.01
TRAPPC9-211ENST00000521700 DOCK3Q8IZD9 2030 aa21.38■■□□□ 1.01
TRAPPC9-211ENST00000521700 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
TRAPPC9-211ENST00000521700 CCDC129Q6ZRS4 1044 aa21.38■■□□□ 1.01
TRAPPC9-211ENST00000521700 OSBPL3Q9H4L5 887 aa21.38■■□□□ 1.01
TRAPPC9-211ENST00000521700 FLT3LGP49771 235 aa21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 ICA1Q05084 483 aa21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 Q3C1V9 767 aa21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 NACAP1Q9BZK3 213 aa21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 TMX2Q9Y320 296 aa21.37■■□□□ 1.01
TRAPPC9-211ENST00000521700 ROBO3Q96MS0 1386 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 TRIM6-TRIM34B2RNG4 842 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 RASA1P20936 1047 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 GRK4P32298 578 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 KIAA1755Q5JYT7 1200 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 GPRC5AQ8NFJ5 357 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 COA7Q96BR5 231 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 RPAP3Q9H6T3 665 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 ARHGEF10LQ9HCE6 1279 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
TRAPPC9-211ENST00000521700 FOXP2O15409 715 aa21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 MYCP01106 439 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 TICAM2Q86XR7 235 aa21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 GTF3C2Q8WUA4 911 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 FAM227BQ96M60 508 aa21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 KANSL2Q9H9L4 492 aa21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 KIAA0100Q14667 2235 aaKnown RBP21.35■■□□□ 1.01
TRAPPC9-211ENST00000521700 CENPFP49454 3210 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 EEF2P13639 858 aaKnown RBP21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 ERVK-9P63128 1117 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 ERVK-24P63145 666 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 IRF5Q13568 498 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 TMEM106CQ9BVX2 250 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 NAPBQ9H115 298 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
TRAPPC9-211ENST00000521700 A0A0D9SFI3 127 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 ADCY3O60266 1144 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms