RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CYB5D2Q8WUJ1 264 aa7.61□□□□□ -1.19
SKP1-207ENST00000520417 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
SKP1-207ENST00000520417 LMCD1Q9NZU5 365 aa7.61□□□□□ -1.19
SKP1-207ENST00000520417 GGT7Q9UJ14 662 aa7.61□□□□□ -1.19
SKP1-207ENST00000520417 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
SKP1-207ENST00000520417 WASH4PA8MWX3 477 aa7.6□□□□□ -1.19
SKP1-207ENST00000520417 CHURC1-FNTBB4DL54 471 aa7.6□□□□□ -1.19
SKP1-207ENST00000520417 YBX3P16989 372 aaKnown RBP eCLIP7.6□□□□□ -1.192e-12■■■□□ 15.2
SKP1-207ENST00000520417 KCNMB1Q16558 191 aa7.6□□□□□ -1.19
SKP1-207ENST00000520417 DNAJB8Q8NHS0 232 aa7.6□□□□□ -1.19
SKP1-207ENST00000520417 SLAMF8Q9P0V8 285 aa7.6□□□□□ -1.19
SKP1-207ENST00000520417 POLR3KQ9Y2Y1 108 aaPredicted RBP7.6□□□□□ -1.19
SKP1-207ENST00000520417 HTR3BO95264 441 aa7.59□□□□□ -1.19
SKP1-207ENST00000520417 MPP2Q14168 576 aa7.59□□□□□ -1.19
SKP1-207ENST00000520417 THAP5Q7Z6K1 395 aa7.59□□□□□ -1.19
SKP1-207ENST00000520417 CREG2Q8IUH2 290 aa7.59□□□□□ -1.19
SKP1-207ENST00000520417 CTNND2Q9UQB3 1225 aa7.59□□□□□ -1.19
SKP1-207ENST00000520417 TPP2P29144 1249 aaPredicted RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 GBP1P32455 592 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 EIF4A3P38919 411 aaKnown RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 AFMP43652 599 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 MLECQ14165 292 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 CWF19L2Q2TBE0 894 aaKnown RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 TMEM201Q5SNT2 666 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 ZNF648Q5T619 568 aaPredicted RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 LCE3BQ5TA77 95 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 FBXL19Q6PCT2 694 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 HS2ST1Q7LGA3 356 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 REC114Q7Z4M0 266 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 ZSWIM9Q86XI8 627 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 BAHD1Q8TBE0 780 aaPredicted RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 PIWIL2Q8TC59 973 aaKnown RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 Q96M66 194 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 KCNH3Q9ULD8 1083 aa7.58□□□□□ -1.2
SKP1-207ENST00000520417 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
SKP1-207ENST00000520417 LRRN2O75325 713 aa7.57□□□□□ -1.2
SKP1-207ENST00000520417 FAM196AQ6ZSG2 479 aa7.57□□□□□ -1.2
SKP1-207ENST00000520417 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
SKP1-207ENST00000520417 CCDC74BQ96LY2 380 aa7.57□□□□□ -1.2
SKP1-207ENST00000520417 KIF2CQ99661 725 aa7.57□□□□□ -1.2
SKP1-207ENST00000520417 TRIT1Q9H3H1 467 aaKnown RBP7.57□□□□□ -1.2
SKP1-207ENST00000520417 LRRC10BA6NIK2 292 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 MCM4P33991 863 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 FYB2Q5VWT5 728 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
SKP1-207ENST00000520417 TMEM40Q8WWA1 233 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 KIRREL1Q96J84 757 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 ALPK1Q96QP1 1244 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 GPATCH2Q9NW75 528 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
SKP1-207ENST00000520417 GARTP22102 1010 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 HK2P52789 917 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 MLANAQ16655 118 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 TMPRSS7Q7RTY8 843 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
SKP1-207ENST00000520417 PRR36Q9H6K5 1346 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 DNAJC25-GNG10A0A024R161 153 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 DNAJA2O60884 412 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 FARP2O94887 1054 aaPredicted RBP7.54□□□□□ -1.2
SKP1-207ENST00000520417 C8AP07357 584 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 RAG1P15918 1043 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 LTKP29376 864 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 MRPL58Q14197 206 aaKnown RBP7.54□□□□□ -1.2
SKP1-207ENST00000520417 CLEC16AQ2KHT3 1053 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 SEZ6Q53EL9 994 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 ARSHQ5FYA8 562 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 TMEM67Q5HYA8 995 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 RALGPS1Q5JS13 557 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 DTWD2Q8NBA8 298 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 LIN37Q96GY3 246 aaPredicted RBP7.54□□□□□ -1.2
SKP1-207ENST00000520417 CCDC120Q96HB5 630 aa7.54□□□□□ -1.2
SKP1-207ENST00000520417 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
SKP1-207ENST00000520417 ESR1P03372 595 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 RAC2P15153 192 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 ZNF16P17020 682 aaPredicted RBP7.53□□□□□ -1.2
SKP1-207ENST00000520417 GDNFP39905 211 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 EGR3Q06889 387 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 ZNF124Q15973 351 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 GK5Q6ZS86 529 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 KSR1Q8IVT5 923 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 SYTL4Q96C24 671 aaPredicted RBP7.53□□□□□ -1.2
SKP1-207ENST00000520417 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
SKP1-207ENST00000520417 ROBO2Q9HCK4 1378 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 CRKP46108 304 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
SKP1-207ENST00000520417 APOBRQ0VD83 1088 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 PKN1Q16512 942 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms