RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 RNF208Q9H0X6 261 aa6.91□□□□□ -1.3
CTNNA1-219ENST00000520158 ASCC2Q9H1I8 757 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-219ENST00000520158 EHD4Q9H223 541 aa6.91□□□□□ -1.3
CTNNA1-219ENST00000520158 DNAJC18Q9H819 358 aa6.91□□□□□ -1.3
CTNNA1-219ENST00000520158 BRPF3Q9ULD4 1205 aa6.91□□□□□ -1.3
CTNNA1-219ENST00000520158 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 H0YGN5 161 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 ZAP70P43403 619 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 HMGCS2P54868 508 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 CEP85Q6P2H3 762 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 ERC1Q8IUD2 1116 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 U2AF1L4Q8WU68 220 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 TGFBRAP1Q8WUH2 860 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 C12orf42Q96LP6 360 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 HTATIP2Q9BUP3 242 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 PIH1D3Q9NQM4 214 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 AATFQ9NY61 560 aaKnown RBP eCLIP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 FLT1P17948 1338 aa6.9□□□□□ -1.3
CTNNA1-219ENST00000520158 PLXNB2O15031 1838 aa6.9□□□□□ -1.31
CTNNA1-219ENST00000520158 INHAP05111 366 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 MS4A1P11836 297 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 HSP90AB4PQ58FF6 505 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 LBX2Q6XYB7 198 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 RPAP2Q8IXW5 612 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 FTSJ3Q8IY81 847 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 TRMT44Q8IYL2 757 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 USP6NLQ92738 828 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 P2RX7Q99572 595 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 EMILIN3Q9NT22 766 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 BIN2Q9UBW5 565 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 PALD1Q9ULE6 856 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 ZBED9Q6R2W3 1325 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 RPTORQ8N122 1335 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 MYH1P12882 1939 aa6.89□□□□□ -1.31
CTNNA1-219ENST00000520158 A0A1W2PPC1 479 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 FARP2O94887 1054 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 MYCP01106 439 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 IGHA2P01877 340 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 HMGCRP04035 888 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 HLA-DOAP06340 250 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 ELNP15502 786 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 CYP7A1P22680 504 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 MAPK4P31152 587 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 HERVK_113P62684 666 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 GABPAQ06546 454 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 MAP3K12Q12852 859 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 MTMR2Q13614 643 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 TTF1Q15361 905 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 TTC6Q86TZ1 520 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 GPRC5AQ8NFJ5 357 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 RHPN1Q8TCX5 695 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 DPF3Q92784 378 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 RIOK1Q9BRS2 568 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 KIAA1683Q9H0B3 1180 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 CCDC8Q9H0W5 538 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 ZBTB40Q9NUA8 1239 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 TLR7Q9NYK1 1049 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 TMOD4Q9NZQ9 345 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 SERPINB13Q9UIV8 391 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 NR2E3Q9Y5X4 410 aa6.88□□□□□ -1.31
CTNNA1-219ENST00000520158 CEP290O15078 2479 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 TFRCP02786 760 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 DYNLL1P63167 89 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 IRX3P78415 501 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 Q3C1V9 767 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 MORN1Q5T089 497 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 SIRT2Q8IXJ6 389 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 CRACR2BQ8N4Y2 399 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 SECISBP2LQ93073 1101 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 DEFB118Q96PH6 123 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 NUDT12Q9BQG2 462 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 C1orf115Q9H7X2 142 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 HMX1Q9NP08 348 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 OGDHLQ9ULD0 1010 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 RABGAP1Q9Y3P9 1069 aa6.87□□□□□ -1.31
CTNNA1-219ENST00000520158 TCRBV5S4A2TA0A5A2 114 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms