RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 RBPJLQ9UBG7 517 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
SCUBE2-205ENST00000519535 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 ZMYM1Q5SVZ6 1142 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 C16orf86Q6ZW13 317 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 C12orf42Q96LP6 360 aa16.3■□□□□ 0.2
SCUBE2-205ENST00000519535 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 MPHOSPH10O00566 681 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 ELNP15502 786 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 VCAM1P19320 739 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 FLT3LGP49771 235 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 HERVK_113P62684 666 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
SCUBE2-205ENST00000519535 BAZ2AQ9UIF9 1905 aaKnown RBP16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 FCGRTP55899 365 aa16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 KIF22Q14807 665 aa16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 PORCNQ9H237 461 aa16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
SCUBE2-205ENST00000519535 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 ERC2O15083 957 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 RASA1P20936 1047 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 PDE4AP27815 886 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 NUCB1Q02818 461 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 TRIM32Q13049 653 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 FEZ1Q99689 392 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
SCUBE2-205ENST00000519535 A0A0D9SFI3 127 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 MINDY4BA8MYZ0 360 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 GCLCP48506 637 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 BTBD7Q9P203 1132 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
SCUBE2-205ENST00000519535 MYH7P12883 1935 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 PRDM1O75626 825 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 GNRH1P01148 92 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 IFNL3Q8IZI9 196 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 RAET1EQ8TD07 263 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 PAGR1Q9BTK6 254 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
SCUBE2-205ENST00000519535 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 GRK4P32298 578 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 PRMT2P55345 433 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 ZNF589Q86UQ0 364 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-205ENST00000519535 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 ADCY3O60266 1144 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 ERVK-9P63128 1117 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 ERVK-24P63145 666 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 ICA1Q05084 483 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 TMX2Q9Y320 296 aa16.23■□□□□ 0.19
SCUBE2-205ENST00000519535 INHAP05111 366 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 CCL5P13501 91 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 HOXD10P28358 340 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 USP14P54578 494 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 AAMPQ13685 434 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 GPRC5AQ8NFJ5 357 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 USP6NLQ92738 828 aa16.22■□□□□ 0.19
SCUBE2-205ENST00000519535 EVI5LQ96CN4 794 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms