RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 ROCK2O75116 1388 aaKnown RBP8.57□□□□□ -1.04
CCDC6-203ENST00000518638 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 ITGB4P16144 1822 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 FZD6O60353 706 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 TGFB1P01137 390 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 PDGFAP04085 211 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 MMP10P09238 476 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 HOXC9P31274 260 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 HTRA3P83110 453 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 TMEM130Q8N3G9 435 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 EDEM1Q92611 657 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 TTC9Q92623 222 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 FNDC3AQ9Y2H6 1198 aaKnown RBP8.56□□□□□ -1.04
CCDC6-203ENST00000518638 RGPD2P0DJD1 1756 aa8.56□□□□□ -1.04
CCDC6-203ENST00000518638 C4AP0C0L4 1744 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 F8W735 103 aaPredicted RBP8.55□□□□□ -1.04
CCDC6-203ENST00000518638 SASH3O75995 380 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 ALX3O95076 343 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
CCDC6-203ENST00000518638 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
CCDC6-203ENST00000518638 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 COG3Q96JB2 828 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
CCDC6-203ENST00000518638 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
CCDC6-203ENST00000518638 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 PCSK2P16519 638 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 TARSP26639 723 aaKnown RBP8.54□□□□□ -1.04
CCDC6-203ENST00000518638 SIK1P57059 783 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 TMF1P82094 1093 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 PLAURQ03405 335 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 AAMPQ13685 434 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 PUS7Q96PZ0 661 aaKnown RBP8.54□□□□□ -1.04
CCDC6-203ENST00000518638 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 PIM2Q9P1W9 311 aa8.54□□□□□ -1.04
CCDC6-203ENST00000518638 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 KIF24Q5T7B8 1368 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 RARAP10276 462 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 VEGFAP15692 232 aaPredicted RBP8.53□□□□□ -1.04
CCDC6-203ENST00000518638 DALRD3Q5D0E6 543 aaKnown RBP8.53□□□□□ -1.04
CCDC6-203ENST00000518638 Q6ZS46 218 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 POLIQ9UNA4 740 aa8.53□□□□□ -1.04
CCDC6-203ENST00000518638 SBF1O95248 1867 aa8.52□□□□□ -1.05
CCDC6-203ENST00000518638 SPINK2P20155 84 aa8.52□□□□□ -1.05
CCDC6-203ENST00000518638 GRIK1P39086 918 aa8.52□□□□□ -1.05
CCDC6-203ENST00000518638 USP5P45974 858 aa8.52□□□□□ -1.05
CCDC6-203ENST00000518638 PDE12Q6L8Q7 609 aaKnown RBP8.52□□□□□ -1.05
CCDC6-203ENST00000518638 INTS5Q6P9B9 1019 aaKnown RBP8.52□□□□□ -1.05
CCDC6-203ENST00000518638 TRPM4Q8TD43 1214 aa8.52□□□□□ -1.05
CCDC6-203ENST00000518638 GLB1P16278 677 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 DPEP1P16444 411 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 GPLD1P80108 840 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 DHX32Q7L7V1 743 aaKnown RBP8.51□□□□□ -1.05
CCDC6-203ENST00000518638 LINC00116Q8NCU8 138 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 STOML1Q9UBI4 398 aa8.51□□□□□ -1.05
CCDC6-203ENST00000518638 INSRP06213 1382 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 GLTPD2A6NH11 291 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 KDM6AO15550 1401 aaPredicted RBP8.5□□□□□ -1.05
CCDC6-203ENST00000518638 MMP20O60882 483 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 RFC4P35249 363 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 JAG1P78504 1218 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 MLLT1Q03111 559 aaPredicted RBP8.5□□□□□ -1.05
CCDC6-203ENST00000518638 NBPF6Q5VWK0 638 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 AMIGO3Q86WK7 504 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 GJD3Q8N144 294 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 PIGBQ92521 554 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 NBPF4Q96M43 638 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 SMG9Q9H0W8 520 aaKnown RBP8.5□□□□□ -1.05
CCDC6-203ENST00000518638 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
CCDC6-203ENST00000518638 TLR7Q9NYK1 1049 aaKnown RBP8.5□□□□□ -1.05
CCDC6-203ENST00000518638 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
CCDC6-203ENST00000518638 FLT4P35916 1363 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 TIAM2Q8IVF5 1701 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ZBTB42B2RXF5 422 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 CYP27B1O15528 508 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 NDUFB5O43674 189 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ADAMTS4O75173 837 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-203ENST00000518638 SOX18P35713 384 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 CTCFP49711 727 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-203ENST00000518638 EHHADHQ08426 723 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ZNF438Q7Z4V0 828 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ZDHHC13Q8IUH4 622 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms