RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 A0A1W2PQH9 124 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 KLF4O43474 513 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 SLITRK5O94991 958 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 PROCP04070 461 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 CYP7A1P22680 504 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 ETV3P41162 512 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 RUFY4Q6ZNE9 571 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 GATA6Q92908 595 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 KIF2CQ99661 725 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 DPH2Q9BQC3 489 aaPredicted RBP6.94□□□□□ -1.3
SQLE-202ENST00000518604 DUSP23Q9BVJ7 150 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 PHAXQ9H814 394 aaKnown RBP6.94□□□□□ -1.3
SQLE-202ENST00000518604 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
SQLE-202ENST00000518604 ACRP10323 421 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 NFIAQ12857 509 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 CDK5R2Q13319 367 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 RAB33AQ14088 237 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 DOC2BQ14184 412 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 PPP2R5EQ16537 467 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 CPSF6Q16630 551 aaKnown RBP eCLIP6.93□□□□□ -1.3
SQLE-202ENST00000518604 BBS9Q3SYG4 887 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 NKAPLQ5M9Q1 402 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 UNC5AQ6ZN44 842 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 DNAJB8Q8NHS0 232 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 PPP1R13LQ8WUF5 828 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 MIPEPQ99797 713 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 DBNDD2Q9BQY9 259 aa6.93□□□□□ -1.3
SQLE-202ENST00000518604 METTL22Q9BUU2 404 aaPredicted RBP6.93□□□□□ -1.3
SQLE-202ENST00000518604 UBOX5O94941 541 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 IGLV1-40P01703 118 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 FXNQ16595 210 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 DUSP27Q5VZP5 1158 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 TOP6BLQ8N6T0 577 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
SQLE-202ENST00000518604 XAGE3Q8WTP9 111 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 SIRPGQ9P1W8 387 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
SQLE-202ENST00000518604 IGF2BP3O00425 579 aaKnown RBP eCLIP6.91□□□□□ -1.3
SQLE-202ENST00000518604 U2SURPO15042 1029 aaKnown RBP6.91□□□□□ -1.3
SQLE-202ENST00000518604 IGSF3O75054 1194 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 EOMESO95936 686 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 FAM87AP0C7U9 286 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 ADMP35318 185 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 RNF4P78317 190 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 RSPO4Q2I0M5 234 aaPredicted RBP6.91□□□□□ -1.3
SQLE-202ENST00000518604 SMARCC1Q92922 1105 aaPredicted RBP6.91□□□□□ -1.3
SQLE-202ENST00000518604 MKL1Q969V6 931 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
SQLE-202ENST00000518604 TRIM55Q9BYV6 548 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 MAPK8IP1Q9UQF2 711 aa6.91□□□□□ -1.3
SQLE-202ENST00000518604 CLEC3AO75596 197 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 FSTP19883 344 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 PMS1P54277 932 aaKnown RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 NCAPHQ15003 741 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 C22orf34Q6ZV56 151 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 CDH24Q86UP0 819 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 RNF141Q8WVD5 230 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 MFSD14AQ96MC6 490 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 FBXL18Q96ME1 805 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 ASPNQ9BXN1 380 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 ATG3Q9NT62 314 aa6.9□□□□□ -1.3
SQLE-202ENST00000518604 SUCOQ9UBS9 1254 aaKnown RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 ZNF214Q9UL59 606 aaPredicted RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
SQLE-202ENST00000518604 LEFTY1O75610 366 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 F13BP05160 661 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 KIR3DL1P43629 444 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
SQLE-202ENST00000518604 TMEM192Q8IY95 271 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 VWCEQ96DN2 955 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 KREMEN1Q96MU8 473 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 PRDM5Q9NQX1 630 aaPredicted RBP6.89□□□□□ -1.31
SQLE-202ENST00000518604 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
SQLE-202ENST00000518604 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
SQLE-202ENST00000518604 DYRK3O43781 588 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 ADAM23O75077 832 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 SERINC3Q13530 473 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 NBPF12Q5TAG4 269 aaPredicted RBP6.88□□□□□ -1.31
SQLE-202ENST00000518604 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 OSBPL1AQ9BXW6 950 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
SQLE-202ENST00000518604 FAM170BA6NMN3 283 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 WDR64B1ANS9 1081 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 DDR2Q16832 855 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms