RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 DNAJB8Q8NHS0 232 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 RNF141Q8WVD5 230 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 GATA6Q92908 595 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 TBC1D32Q96NH3 1257 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 DUSP23Q9BVJ7 150 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 MKNK2Q9HBH9 465 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 GTF2IRD1Q9UHL9 959 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 DYNC1LI2O43237 492 aaPredicted RBP4.72□□□□□ -1.65
SKP1-203ENST00000517625 FSTP19883 344 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 GBP1P32455 592 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 KIR3DL1P43629 444 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 RSPO4Q2I0M5 234 aaPredicted RBP4.72□□□□□ -1.65
SKP1-203ENST00000517625 DUSP27Q5VZP5 1158 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 LRP10Q7Z4F1 713 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 TTC6Q86TZ1 520 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 TOP6BLQ8N6T0 577 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 MIPEPQ99797 713 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 ANTXR1Q9H6X2 564 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 PRDM5Q9NQX1 630 aaPredicted RBP4.72□□□□□ -1.65
SKP1-203ENST00000517625 SIRPGQ9P1W8 387 aa4.72□□□□□ -1.65
SKP1-203ENST00000517625 A0A1W2PQH9 124 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 UPK3BL1B0FP48 263 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 UPK3BL2E5RIL1 263 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 U2SURPO15042 1029 aaKnown RBP4.71□□□□□ -1.66
SKP1-203ENST00000517625 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.66
SKP1-203ENST00000517625 KLF4O43474 513 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 DYRK3O43781 588 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 CLEC3AO75596 197 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 UBOX5O94941 541 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 SLITRK5O94991 958 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 FAM87AP0C7U9 286 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 ACRP10323 421 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 NAT2P11245 290 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 ETFBP38117 255 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 PMS1P54277 932 aaKnown RBP4.71□□□□□ -1.66
SKP1-203ENST00000517625 CDK5R2Q13319 367 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 RAB33AQ14088 237 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 DOC2BQ14184 412 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 NCAPHQ15003 741 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 FXNQ16595 210 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 GPAT2Q6NUI2 795 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 UNC5AQ6ZN44 842 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 ANKS3Q6ZW76 656 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 FAM169BQ8N8A8 192 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 PPP1R13LQ8WUF5 828 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 MKL1Q969V6 931 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 FBXL18Q96ME1 805 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 SLC9A7Q96T83 725 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 KIF2CQ99661 725 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 DPH2Q9BQC3 489 aaPredicted RBP4.71□□□□□ -1.66
SKP1-203ENST00000517625 TRIM55Q9BYV6 548 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 ATG3Q9NT62 314 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 PRR13Q9NZ81 148 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 USP35Q9P2H5 1018 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 SUCOQ9UBS9 1254 aaKnown RBP4.71□□□□□ -1.66
SKP1-203ENST00000517625 MRVI1Q9Y6F6 885 aa4.71□□□□□ -1.66
SKP1-203ENST00000517625 EOMESO95936 686 aa4.7□□□□□ -1.66
SKP1-203ENST00000517625 ZNF865P0CJ78 1059 aaPredicted RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 ZNF143P52747 638 aaPredicted RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 PIWIL2Q8TC59 973 aaKnown RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 DHX38Q92620 1227 aaKnown RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 KREMEN1Q96MU8 473 aa4.7□□□□□ -1.66
SKP1-203ENST00000517625 OSBPL1AQ9BXW6 950 aa4.7□□□□□ -1.66
SKP1-203ENST00000517625 PPP1R1BQ9UD71 204 aaPredicted RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 ZNF214Q9UL59 606 aaPredicted RBP4.7□□□□□ -1.66
SKP1-203ENST00000517625 F13BP05160 661 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 ADMP35318 185 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 SERINC3Q13530 473 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 NFE2L2Q16236 605 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 SFRP5Q5T4F7 317 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 RUFY4Q6ZNE9 571 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
SKP1-203ENST00000517625 XAGE3Q8WTP9 111 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 ZNF669Q96BR6 464 aaPredicted RBP4.69□□□□□ -1.66
SKP1-203ENST00000517625 MFSD14AQ96MC6 490 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 SLC6A18Q96N87 628 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 EPN3Q9H201 632 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 KCNH3Q9ULD8 1083 aa4.69□□□□□ -1.66
SKP1-203ENST00000517625 TPX2Q9ULW0 747 aaKnown RBP4.69□□□□□ -1.66
SKP1-203ENST00000517625 COL17A1Q9UMD9 1497 aaPredicted RBP4.69□□□□□ -1.66
SKP1-203ENST00000517625 GNAT3A8MTJ3 354 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 LEFTY1O75610 366 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 POLR2BP30876 1174 aaKnown RBP4.68□□□□□ -1.66
SKP1-203ENST00000517625 SLC7A5Q01650 507 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 DDR2Q16832 855 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 ANKRD39Q53RE8 183 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 ZNF765Q7L2R6 523 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 FAM214BQ7L5A3 538 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 ZDHHC13Q8IUH4 622 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 SHKBP1Q8TBC3 707 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 HNRNPLLQ8WVV9 542 aaKnown RBP4.68□□□□□ -1.66
SKP1-203ENST00000517625 VWCEQ96DN2 955 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 OSBPL2Q9H1P3 480 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 LGR6Q9HBX8 967 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 LEMD3Q9Y2U8 911 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 MSRB2Q9Y3D2 182 aa4.68□□□□□ -1.66
SKP1-203ENST00000517625 FAM170BA6NMN3 283 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms