RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TOMM22Q9NS69 142 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 POLKQ9UBT6 870 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 SMC3Q9UQE7 1217 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 RAD54L2Q9Y4B4 1467 aa5.61□□□□□ -1.51
HMGB1P19-201ENST00000517578 KIF27Q86VH2 1401 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 PLEKHG2Q9H7P9 1386 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 ELP1O95163 1332 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 MYBBP1AQ9BQG0 1328 aaKnown RBP5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 FZD6O60353 706 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 NEMFO60524 1076 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 RPS6KA5O75582 802 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 ABCD1P33897 745 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 PEX19P40855 299 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 PREPP48147 710 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 PDE3AQ14432 1141 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 MAP9Q49MG5 647 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 XKR5Q6UX68 686 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 SYT10Q6XYQ8 523 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC186Q7Z3E2 898 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 FILIP1Q7Z7B0 1213 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 TXNDC2Q86VQ3 553 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 KIAA1524Q8TCG1 905 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZBTB9Q96C00 473 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 HHIPQ96QV1 700 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 CHRDQ9H2X0 955 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 EGFL7Q9UHF1 273 aa5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 LRRFIP2Q9Y608 721 aaKnown RBP5.6□□□□□ -1.51
HMGB1P19-201ENST00000517578 KIF15Q9NS87 1388 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 TRPA1O75762 1119 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 CDKL5O76039 1030 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 ACTN2P35609 894 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 IRAK1P51617 712 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 MNAT1P51948 309 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 NLRP12P59046 1061 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 TUBB4BP68371 445 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 HGSNATQ68CP4 663 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 SPTY2D1Q68D10 685 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 ANKRD34AQ69YU3 496 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 DTX1Q86Y01 620 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 CLEC10AQ8IUN9 316 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 MIPOL1Q8TD10 442 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 WNT8BQ93098 351 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 MIEF2Q96C03 454 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 FAM83CQ9BQN1 747 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 TRIM6Q9C030 488 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 IQCGQ9H095 443 aaKnown RBP5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 ACBD3Q9H3P7 528 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 RWDD1Q9H446 243 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 HOMER3Q9NSC5 361 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 STK26Q9P289 416 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 SOX13Q9UN79 622 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 TRAK1Q9UPV9 953 aa5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P19-201ENST00000517578 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 UACAQ9BZF9 1416 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 CCDC171Q6TFL3 1326 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 GOLGA6L10A6NI86 522 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 BRD1O95696 1058 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 BMP3P12645 472 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 GCFC2P16383 781 aaKnown RBP5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 CES1P23141 567 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 NF2P35240 595 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 CORO7P57737 925 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 BEND4Q6ZU67 534 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 SDCCAG8Q86SQ7 713 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 CCDC50Q8IVM0 306 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 FMNL2Q96PY5 1086 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 STK31Q9BXU1 1019 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 RNF208Q9H0X6 261 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 ATG3Q9NT62 314 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 GNL3LQ9NVN8 582 aaKnown RBP5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 CLIP2Q9UDT6 1046 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 ABCF2Q9UG63 623 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 NLRP1Q9C000 1473 aa5.58□□□□□ -1.52
HMGB1P19-201ENST00000517578 IL16Q14005 1332 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 A6NNZ2 444 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 FAM177BA6PVY3 158 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 PAX4O43316 350 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 KINO60870 393 aaKnown RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 RLBP1P12271 317 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 TNNT1P13805 278 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 TAL1P17542 331 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 PAX7P23759 505 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 GRIK1P39086 918 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 USP5P45974 858 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 CABP4P57796 275 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 TUBB8Q3ZCM7 444 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 HSP90AB2PQ58FF8 381 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 KLHL10Q6JEL2 608 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 INTS5Q6P9B9 1019 aaKnown RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 TMCO3Q6UWJ1 677 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms