RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 F13BP05160 661 aa9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 GBP1P32455 592 aa9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 TNNI3KQ59H18 835 aa9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 ZNF746Q6NUN9 644 aaPredicted RBP9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 SLC9A7Q96T83 725 aa9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 PPP1R1BQ9UD71 204 aaPredicted RBP9.98□□□□□ -0.81
SNORA48.9-201ENST00000516419 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 ACRP10323 421 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 CASP7P55210 303 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 DUSP27Q5VZP5 1158 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 SHISA5Q8N114 240 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 DNAJB8Q8NHS0 232 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 RIN3Q8TB24 985 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 METTL22Q9BUU2 404 aaPredicted RBP9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
SNORA48.9-201ENST00000516419 FAM170BA6NMN3 283 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 EOMESO95936 686 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 FURINP09958 794 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 ETV3P41162 512 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 CDH24Q86UP0 819 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 SHKBP1Q8TBC3 707 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 UBXN4Q92575 508 aa9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
SNORA48.9-201ENST00000516419 WDR64B1ANS9 1081 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 UBOX5O94941 541 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 CYP7A1P22680 504 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 CHMP4BP1P59074 171 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 RBL2Q08999 1139 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 PPP2R5EQ16537 467 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 CPSF6Q16630 551 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 UNC5AQ6ZN44 842 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 ZNF765Q7L2R6 523 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 OSBPL1AQ9BXW6 950 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 GTF2IRD1Q9UHL9 959 aa9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 TPX2Q9ULW0 747 aaKnown RBP9.95□□□□□ -0.82
SNORA48.9-201ENST00000516419 A0A1W2PQH9 124 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 ANKS3Q6ZW76 656 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 COX4I2Q96KJ9 171 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 DHRS1Q96LJ7 313 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
SNORA48.9-201ENST00000516419 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
SNORA48.9-201ENST00000516419 ACTR10Q9NZ32 417 aa9.93□□□□□ -0.82
SNORA48.9-201ENST00000516419 MAPK8IP1Q9UQF2 711 aa9.93□□□□□ -0.82
SNORA48.9-201ENST00000516419 IGF2BP3O00425 579 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 ZYXQ15942 572 aaKnown RBP9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 ZDHHC13Q8IUH4 622 aa9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 HEXIM2Q96MH2 286 aaKnown RBP9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 KREMEN1Q96MU8 473 aa9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 TNKS2Q9H2K2 1166 aa9.92□□□□□ -0.82
SNORA48.9-201ENST00000516419 KLF4O43474 513 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 CLEC3AO75596 197 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 PRSS36Q5K4E3 855 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 SFRP5Q5T4F7 317 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 TMEM192Q8IY95 271 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 RNF141Q8WVD5 230 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 SLC6A18Q96N87 628 aa9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 PHAXQ9H814 394 aaKnown RBP9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 COL17A1Q9UMD9 1497 aaPredicted RBP9.91□□□□□ -0.82
SNORA48.9-201ENST00000516419 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 FAM86C2PA6NEL3 165 aa9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 RNF4P78317 190 aa9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 LEMD3Q9Y2U8 911 aa9.9□□□□□ -0.82
SNORA48.9-201ENST00000516419 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 KIR3DL1P43629 444 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 C22orf34Q6ZV56 151 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 VWCEQ96DN2 955 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 FBXL18Q96ME1 805 aa9.89□□□□□ -0.83
SNORA48.9-201ENST00000516419 RAB33AQ14088 237 aa9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 NBPF12Q5TAG4 269 aaPredicted RBP9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 DNAJC2Q99543 621 aaKnown RBP9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 PIM2Q9P1W9 311 aa9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 ZNF214Q9UL59 606 aaPredicted RBP9.88□□□□□ -0.83
SNORA48.9-201ENST00000516419 PRR19A6NJB7 356 aa9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 FXNQ16595 210 aa9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 LARP1BQ659C4 914 aaKnown RBP9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 ARHGAP27Q6ZUM4 889 aa9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 SMARCC1Q92922 1105 aaPredicted RBP9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 TRIM55Q9BYV6 548 aa9.87□□□□□ -0.83
SNORA48.9-201ENST00000516419 CYP26A1O43174 497 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms