RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 IFNGR1P15260 489 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 EPB42P16452 691 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PI3P19957 117 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NME2P22392 152 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RPL10P27635 214 aaKnown RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TPP2P29144 1249 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ARID4AP29374 1257 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CDR1P51861 262 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ETF1P62495 437 aaKnown RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TRIM26Q12899 539 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CAMK2GQ13555 558 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 INF2Q27J81 1249 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PRSS53Q2L4Q9 553 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DPY19L1Q2PZI1 675 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SEZ6Q53EL9 994 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ARSHQ5FYA8 562 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DENND5AQ6IQ26 1287 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FSTL4Q6MZW2 842 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LETMD1Q6P1Q0 360 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GK5Q6ZS86 529 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LIMS2Q7Z4I7 341 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LSRQ86X29 649 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NPAS4Q8IUM7 802 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LRRC56Q8IYG6 542 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CACTIN-AS1Q8N1I8 211 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GOLM1Q8NBJ4 401 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RNF214Q8ND24 703 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PHC3Q8NDX5 983 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ADCY4Q8NFM4 1077 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NETO1Q8TDF5 533 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SNX29Q8TEQ0 813 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DPF3Q92784 378 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 KCNN1Q92952 543 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 OSBP2Q969R2 916 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ACSBG1Q96GR2 724 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 HHIPL1Q96JK4 782 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NACC1Q96RE7 527 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 JMJD8Q96S16 334 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RBSNQ9H1K0 784 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CNTD2Q9H8S5 307 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CYP4F12Q9HCS2 524 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 AP5S1Q9NUS5 200 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 BSDC1Q9NW68 430 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 REV1Q9UBZ9 1251 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ING1Q9UK53 422 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SERPINA10Q9UK55 444 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PCOLCE2Q9UKZ9 415 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TPX2Q9ULW0 747 aaKnown RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 JAG2Q9Y219 1238 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SLC5A6Q9Y289 635 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FNDC3AQ9Y2H6 1198 aaKnown RBP0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ZNF451Q9Y4E5 1061 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MRVI1Q9Y6F6 885 aa0.74□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LCHNA4D1U4 455 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SPDYE3A6NKU9 549 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NUDT19A8MXV4 375 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 H0Y8X5 98 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MSCO60682 206 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PRNPP04156 253 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SRFP11831 508 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 EDN3P14138 238 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 INSRRP14616 1297 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PLCG1P19174 1290 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 VIPR1P32241 457 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 STAT3P40763 770 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LIG3P49916 1009 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SLURP1P55000 103 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CABP4P57796 275 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TEKQ02763 1124 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MVKQ03426 396 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PRKCQQ04759 706 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FMR1Q06787 632 aaKnown RBP eCLIP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 EGR3Q06889 387 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DLX2Q07687 328 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SMAD4Q13485 552 aaKnown RBP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PPP2R5DQ14738 602 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CCDC85BQ15834 202 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 C21orf62-AS1Q17RA5 79 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GAB4Q2WGN9 574 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RTP2Q5QGT7 225 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 AXDND1Q5T1B0 1012 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DUSP27Q5VZP5 1158 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ANKRD34AQ69YU3 496 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LILRA6Q6PI73 481 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CRTC3Q6UUV7 619 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LRSAM1Q6UWE0 723 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SPRED1Q7Z699 444 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FBXO33Q7Z6M2 555 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CCDC125Q86Z20 511 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 IGDCC3Q8IVU1 814 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 Q8N1X5 172 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ABTB2Q8N961 1025 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DTWD2Q8NBA8 298 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ZNF296Q8WUU4 475 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TCTN2Q96GX1 697 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TMEM87BQ96K49 555 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SPATA25Q9BR10 227 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CEP41Q9BYV8 373 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 BACH2Q9BYV9 841 aa0.73□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FOXQ1Q9C009 403 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms