RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EIF4BP23588 611 aaKnown RBP5.76□□□□□ -1.49
HERC4-215ENST00000515753 TRHRP34981 398 aaPredicted RBP5.76□□□□□ -1.49
HERC4-215ENST00000515753 DAB2P98082 770 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 MAP3K11Q16584 847 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 ZNF746Q6NUN9 644 aaPredicted RBP5.76□□□□□ -1.49
HERC4-215ENST00000515753 LILRA6Q6PI73 481 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 ATG14Q6ZNE5 492 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 TMC4Q7Z404 712 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 DUSP9Q99956 384 aaKnown RBP5.76□□□□□ -1.49
HERC4-215ENST00000515753 ADAMTS10Q9H324 1103 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 EPB41L4BQ9H329 900 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 AK5Q9Y6K8 562 aa5.76□□□□□ -1.49
HERC4-215ENST00000515753 GFRA2O00451 464 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 RAC2P15153 192 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 CYP7A1P22680 504 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 ITGAEP38570 1179 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 CREG2Q8IUH2 290 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 SIAH1Q8IUQ4 282 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 MYLIPQ8WY64 445 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 CCDC120Q96HB5 630 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
HERC4-215ENST00000515753 ETV2O00321 342 aaPredicted RBP5.74□□□□□ -1.49
HERC4-215ENST00000515753 PGRP06401 933 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 LMNB1P20700 586 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 KIR3DL1P43629 444 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 CCDC85BQ15834 202 aaPredicted RBP5.74□□□□□ -1.49
HERC4-215ENST00000515753 KCNA10Q16322 511 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 Q96M66 194 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 C19orf44Q9H6X5 657 aa5.74□□□□□ -1.49
HERC4-215ENST00000515753 TPP2P29144 1249 aaPredicted RBP5.73□□□□□ -1.49
HERC4-215ENST00000515753 ST13P50502 369 aaKnown RBP5.73□□□□□ -1.49
HERC4-215ENST00000515753 KCNN1Q92952 543 aa5.73□□□□□ -1.49
HERC4-215ENST00000515753 TMEM87BQ96K49 555 aa5.73□□□□□ -1.49
HERC4-215ENST00000515753 DUSP15Q9H1R2 295 aaPredicted RBP5.73□□□□□ -1.49
HERC4-215ENST00000515753 CD320Q9NPF0 282 aa5.73□□□□□ -1.49
HERC4-215ENST00000515753 RNF19AQ9NV58 838 aa5.73□□□□□ -1.49
HERC4-215ENST00000515753 PARP2Q9UGN5 583 aa5.73□□□□□ -1.49
HERC4-215ENST00000515753 TCAF2A6NFQ2 919 aa5.72□□□□□ -1.49
HERC4-215ENST00000515753 TMPRSS7Q7RTY8 843 aa5.72□□□□□ -1.49
HERC4-215ENST00000515753 MRPL41Q8IXM3 137 aaKnown RBP5.72□□□□□ -1.49
HERC4-215ENST00000515753 CRELD1Q96HD1 420 aa5.72□□□□□ -1.49
HERC4-215ENST00000515753 RNF32Q9H0A6 362 aa5.72□□□□□ -1.49
HERC4-215ENST00000515753 SMG5Q9UPR3 1016 aaKnown RBP5.72□□□□□ -1.49
HERC4-215ENST00000515753 HPXP02790 462 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 ETV3P41162 512 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 MFAP1P55081 439 aaKnown RBP5.71□□□□□ -1.5
HERC4-215ENST00000515753 PSMD2Q13200 908 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 SLC6A19Q695T7 634 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 CIAPIN1Q6FI81 312 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 TTLL10Q6ZVT0 673 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 DNAJB8Q8NHS0 232 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.5
HERC4-215ENST00000515753 JARID2Q92833 1246 aaPredicted RBP5.71□□□□□ -1.5
HERC4-215ENST00000515753 COX4I2Q96KJ9 171 aa5.71□□□□□ -1.5
HERC4-215ENST00000515753 UPK3BL1B0FP48 263 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 UPK3BL2E5RIL1 263 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 INHBBP09529 407 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 MED14OSP0DP75 135 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 LIG3P49916 1009 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 RPS26P62854 115 aaKnown RBP5.7□□□□□ -1.5
HERC4-215ENST00000515753 XPCQ01831 940 aaPredicted RBP5.7□□□□□ -1.5
HERC4-215ENST00000515753 EGR3Q06889 387 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 AGMOQ6ZNB7 445 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 AMIGO3Q86WK7 504 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 ACSF2Q96CM8 615 aaPredicted RBP5.7□□□□□ -1.5
HERC4-215ENST00000515753 BCL2L13Q9BXK5 485 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 MIR1-1HGQ9H1L0 117 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 CEP131Q9UPN4 1083 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 CORINQ9Y5Q5 1042 aa5.7□□□□□ -1.5
HERC4-215ENST00000515753 B8ZZF3 427 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 PRRG2O14669 202 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 NUAK1O60285 661 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 SORBS3O60504 671 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 LRRN2O75325 713 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 CTSHP09668 335 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
HERC4-215ENST00000515753 GLDCP23378 1020 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 LINC00310P59036 64 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 MRPL58Q14197 206 aaKnown RBP5.69□□□□□ -1.5
HERC4-215ENST00000515753 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 MEI1Q5TIA1 1274 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 MCATQ8IVS2 390 aaKnown RBP5.69□□□□□ -1.5
HERC4-215ENST00000515753 PPP1R13LQ8WUF5 828 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 SLC26A8Q96RN1 970 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 NOC4LQ9BVI4 516 aaKnown RBP5.69□□□□□ -1.5
HERC4-215ENST00000515753 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 SP110Q9HB58 689 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 TLR6Q9Y2C9 796 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 NCANO14594 1321 aa5.69□□□□□ -1.5
HERC4-215ENST00000515753 USP31Q70CQ4 1352 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 ZGLP1P0C6A0 271 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 RLBP1P12271 317 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 BUD31P41223 144 aaPredicted RBP5.68□□□□□ -1.5
HERC4-215ENST00000515753 TAGLNQ01995 201 aaKnown RBP5.68□□□□□ -1.5
HERC4-215ENST00000515753 PDE4BQ07343 736 aa5.68□□□□□ -1.5
HERC4-215ENST00000515753 TRIM26Q12899 539 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms