RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IL27Q8NEV9 243 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 CEP95Q96GE4 821 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 CLMNQ96JQ2 1002 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 TMEM87BQ96K49 555 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 TBC1D2Q9BYX2 928 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 MTMR4Q9NYA4 1195 aa24.7■■□□□ 1.54
LSM6-207ENST00000515311 USP17L5A8MUK1 530 aa24.69■■□□□ 1.54
LSM6-207ENST00000515311 ICA1Q05084 483 aa24.69■■□□□ 1.54
LSM6-207ENST00000515311 SAPCD2Q86UD0 394 aa24.69■■□□□ 1.54
LSM6-207ENST00000515311 TTC14Q96N46 770 aa24.69■■□□□ 1.54
LSM6-207ENST00000515311 UPF3BQ9BZI7 483 aaKnown RBP24.69■■□□□ 1.54
LSM6-207ENST00000515311 TLL2Q9Y6L7 1015 aa24.69■■□□□ 1.54
LSM6-207ENST00000515311 TNKSO95271 1327 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 SPDYE5A6NIY4 337 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 NMT2O60551 498 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 TTLL1O95922 423 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 CPA1P15085 419 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 HUNKP57058 714 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 RABEP1Q15276 862 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 CHST3Q7LGC8 479 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 DGKHQ86XP1 1220 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 ERO1BQ86YB8 467 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 FBXL16Q8N461 479 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 ENAHQ8N8S7 591 aaPredicted RBP24.68■■□□□ 1.54
LSM6-207ENST00000515311 ANKS1AQ92625 1134 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 ZKSCAN3Q9BRR0 538 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 NYAP2Q9P242 653 aa24.68■■□□□ 1.54
LSM6-207ENST00000515311 ERICH2A1L162 156 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 IFIT3O14879 490 aaKnown RBP24.67■■□□□ 1.54
LSM6-207ENST00000515311 APLP1P51693 650 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 SEC23AQ15436 765 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 TMEM67Q5HYA8 995 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 RCSD1Q6JBY9 416 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 IGDCC4Q8TDY8 1250 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 WDR18Q9BV38 432 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 ELP3Q9H9T3 547 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 AS3MTQ9HBK9 375 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.67■■□□□ 1.54
LSM6-207ENST00000515311 SYNPO2Q9UMS6 1093 aa24.67■■□□□ 1.54
LSM6-207ENST00000515311 CLEC10AQ8IUN9 316 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 SIAH1Q8IUQ4 282 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 SLC10A4Q96EP9 437 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 HHIPL1Q96JK4 782 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 ARHGEF10LQ9HCE6 1279 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 STX8Q9UNK0 236 aa24.66■■□□□ 1.54
LSM6-207ENST00000515311 SH2B2O14492 632 aaPredicted RBP24.65■■□□□ 1.54
LSM6-207ENST00000515311 EEF2P13639 858 aaKnown RBP24.65■■□□□ 1.54
LSM6-207ENST00000515311 LIFRP42702 1097 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 NEK4P51957 841 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 PPATQ06203 517 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 TMTC2Q8N394 836 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 MKL1Q969V6 931 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 AGXT2Q9BYV1 514 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 ALDH8A1Q9H2A2 487 aaPredicted RBP24.65■■□□□ 1.54
LSM6-207ENST00000515311 SH2D4AQ9H788 454 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 CREBZFQ9NS37 354 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 PDRG1Q9NUG6 133 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 ZHX2Q9Y6X8 837 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 PTPRFP10586 1907 aa24.65■■□□□ 1.54
LSM6-207ENST00000515311 WTAPQ15007 396 aa24.64■■□□□ 1.54
LSM6-207ENST00000515311 ZNF280CQ8ND82 737 aa24.64■■□□□ 1.54
LSM6-207ENST00000515311 TCEANC2Q96MN5 208 aa24.64■■□□□ 1.54
LSM6-207ENST00000515311 LY9Q9HBG7 655 aa24.64■■□□□ 1.54
LSM6-207ENST00000515311 ABT1Q9ULW3 272 aaKnown RBP24.64■■□□□ 1.54
LSM6-207ENST00000515311 TOP1P11387 765 aaKnown RBP24.63■■□□□ 1.53
LSM6-207ENST00000515311 FGD1P98174 961 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 PPIL2Q13356 520 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 IFIT1BQ5T764 474 aaKnown RBP24.63■■□□□ 1.53
LSM6-207ENST00000515311 CCDC84Q86UT8 332 aaPredicted RBP24.63■■□□□ 1.53
LSM6-207ENST00000515311 OPTNQ96CV9 577 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 LRRC2Q9BYS8 371 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 CLIP2Q9UDT6 1046 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 TMX2Q9Y320 296 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 AFG3L2Q9Y4W6 797 aa24.63■■□□□ 1.53
LSM6-207ENST00000515311 ATP2B2Q01814 1243 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 RGMBQ6NW40 437 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 Q6ZUG5 572 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 SGMS1Q86VZ5 419 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 CNKSR2Q8WXI2 1034 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 OTUD5Q96G74 571 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 TMEM47Q9BQJ4 181 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 KIAA1683Q9H0B3 1180 aa24.62■■□□□ 1.53
LSM6-207ENST00000515311 A0A1W2PRG0 241 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 ZBTB48P10074 688 aaPredicted RBP24.61■■□□□ 1.53
LSM6-207ENST00000515311 SPP2Q13103 211 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 ANKRD1Q15327 319 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 ACER1Q8TDN7 264 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 WNK4Q96J92 1243 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 KAT14Q9H8E8 782 aa24.61■■□□□ 1.53
LSM6-207ENST00000515311 GPHNQ9NQX3 736 aaPredicted RBP24.61■■□□□ 1.53
LSM6-207ENST00000515311 LOC285556D6RIA3 1793 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 USP17L10C9JJH3 530 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 ECE1P42892 770 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 BACE1P56817 501 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 TOB2Q14106 344 aaPredicted RBP24.6■■□□□ 1.53
LSM6-207ENST00000515311 FEZ1Q99689 392 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 KCNH4Q9UQ05 1017 aa24.6■■□□□ 1.53
LSM6-207ENST00000515311 TRIM75PA6NK02 468 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 C19orf81C9J6K1 198 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 CXCL11O14625 94 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms