RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HID1Q8IV36 788 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
RFC1-216ENST00000514572 RNF214Q8ND24 703 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 FAM13CQ8NE31 585 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 EXOC2Q96KP1 924 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 SLC6A18Q96N87 628 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 SUGCTQ9HAC7 445 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 A0A1W2PQU0 124 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 MEGF11A6BM72 1044 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 FAM86C2PA6NEL3 165 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 CBFA2T2O43439 604 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 HCLS1P14317 486 aaPredicted RBP7.27□□□□□ -1.25
RFC1-216ENST00000514572 DGKGP49619 791 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 SLBPQ14493 270 aaKnown RBP eCLIP7.27□□□□□ -1.25
RFC1-216ENST00000514572 UBE3DQ7Z6J8 389 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 MFSD3Q96ES6 412 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 DHRS1Q96LJ7 313 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
RFC1-216ENST00000514572 NCOA5Q9HCD5 579 aaKnown RBP7.27□□□□□ -1.25
RFC1-216ENST00000514572 CWC22Q9HCG8 908 aaKnown RBP7.27□□□□□ -1.25
RFC1-216ENST00000514572 COL17A1Q9UMD9 1497 aaPredicted RBP7.27□□□□□ -1.25
RFC1-216ENST00000514572 A0A087X0B3 334 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 WISP1O95388 367 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 STAT3P40763 770 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 CYB5D2Q8WUJ1 264 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 HAUS7Q99871 368 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 KLHL25Q9H0H3 589 aa7.26□□□□□ -1.25
RFC1-216ENST00000514572 ANKRD34BA5PLL1 514 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 C9IYK1 514 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 TIAF1O95411 115 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 ADH5P11766 374 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 PABPC4Q13310 644 aaKnown RBP eCLIP7.25□□□□□ -1.25
RFC1-216ENST00000514572 CBX2Q14781 532 aaPredicted RBP7.25□□□□□ -1.25
RFC1-216ENST00000514572 KIAA1211Q6ZU35 1233 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 FBXO11Q86XK2 927 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 NIM1KQ8IY84 436 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 SMG8Q8ND04 991 aaKnown RBP7.25□□□□□ -1.25
RFC1-216ENST00000514572 SMARCC1Q92922 1105 aaPredicted RBP7.25□□□□□ -1.25
RFC1-216ENST00000514572 KIF2CQ99661 725 aa7.25□□□□□ -1.25
RFC1-216ENST00000514572 CST3P01034 146 aaPredicted RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 EPHX1P07099 455 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 BCRP11274 1271 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 FNDC3BQ53EP0 1204 aaKnown RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 AXDND1Q5T1B0 1012 aaPredicted RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 PPP1R13LQ8WUF5 828 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 CCDC74BQ96LY2 380 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 DPH2Q9BQC3 489 aaPredicted RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 FAM126AQ9BYI3 521 aaPredicted RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 ATXN3LQ9H3M9 355 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 APEX2Q9UBZ4 518 aa7.24□□□□□ -1.25
RFC1-216ENST00000514572 MRPS23Q9Y3D9 190 aaKnown RBP7.24□□□□□ -1.25
RFC1-216ENST00000514572 PLD2O14939 933 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 SHOXO15266 292 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 PARNO95453 639 aaKnown RBP7.23□□□□□ -1.25
RFC1-216ENST00000514572 PDGFRBP09619 1106 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 NAT2P11245 290 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 TTLL4Q14679 1199 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 AKAP4Q5JQC9 854 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 YOD1Q5VVQ6 348 aaPredicted RBP7.23□□□□□ -1.25
RFC1-216ENST00000514572 TDRD10Q5VZ19 366 aaKnown RBP7.23□□□□□ -1.25
RFC1-216ENST00000514572 RNF180Q86T96 592 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 ZNF227Q86WZ6 799 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 KCT2Q8NC54 265 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 BAHD1Q8TBE0 780 aaPredicted RBP7.23□□□□□ -1.25
RFC1-216ENST00000514572 ISL2Q96A47 359 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 DHRS4Q9BTZ2 278 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.23□□□□□ -1.25
RFC1-216ENST00000514572 RAD18Q9NS91 495 aa7.23□□□□□ -1.25
RFC1-216ENST00000514572 GSG1L2A8MUP6 293 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 AGRPO00253 132 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 FGFR1P11362 822 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 L1CAMP32004 1257 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 PPP2R2AP63151 447 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 C21orf62-AS1Q17RA5 79 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 DUOXA2Q1HG44 320 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 FAM209AQ5JX71 171 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 DHX37Q8IY37 1157 aaKnown RBP7.22□□□□□ -1.25
RFC1-216ENST00000514572 VWCEQ96DN2 955 aa7.22□□□□□ -1.25
RFC1-216ENST00000514572 AARSD1Q9BTE6 412 aaKnown RBP7.22□□□□□ -1.25
RFC1-216ENST00000514572 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
RFC1-216ENST00000514572 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 TRAV20A0A0B4J274 112 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 FAM83GA6ND36 823 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 IRS4O14654 1257 aaPredicted RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 CLEC3AO75596 197 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 ITGAVP06756 1048 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 CDKN1CP49918 316 aaPredicted RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 SOX4Q06945 474 aaPredicted RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 HSP90AA2PQ14568 343 aaPredicted RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 SV2CQ496J9 727 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 JAMLQ86YT9 394 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms