RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 DESP17661 470 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 ARFGAP2Q8N6H7 521 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 PARD6BQ9BYG5 372 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 SEC31BQ9NQW1 1179 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 ARID5AQ03989 594 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 SPAG1Q07617 926 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 SEPT7Q16181 437 aaKnown RBP14.69□□□□□ -0.06
TCOF1-213ENST00000514442 MFSD14BQ5SR56 506 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 TM6SF1Q9BZW5 370 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 CEP83Q9Y592 693 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 TADA2BQ86TJ2 420 aa14.69□□□□□ -0.06
TCOF1-213ENST00000514442 TRIM66O15016 1216 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 GYS2P54840 703 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CCDC174Q6PII3 467 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CNGA4Q8IV77 575 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 IFNL3Q8IZI9 196 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 MADDQ8WXG6 1647 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 E9PCH4 1651 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 PPP2R5AQ15172 486 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 PIGBQ92521 554 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 VPS54Q9P1Q0 977 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CCNT1O60563 726 aaKnown RBP14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CYLC1P35663 651 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CCT5P48643 541 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 PPFIA1Q13136 1202 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CEP85LQ5SZL2 805 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 SARM1Q6SZW1 724 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 KCNH3Q9ULD8 1083 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 ABCA6Q8N139 1617 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CETN2P41208 172 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 WHAMMP3Q1A5X7 153 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 ADCK5Q3MIX3 580 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 AP1ARQ63HQ0 302 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 CC2D1AQ6P1N0 951 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-213ENST00000514442 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 ANKS4BQ8N8V4 417 aa14.68□□□□□ -0.06
TCOF1-213ENST00000514442 NEDD9Q14511 834 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 C11orf57Q6ZUT1 292 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 MAPK8IP1Q9UQF2 711 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 ANKRD62A6NC57 917 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 KRT86O43790 486 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 PDE8BO95263 885 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 FGAP02671 866 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 GCKP35557 465 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 GNGT1P63211 74 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 KRT83P78385 493 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 MTX1Q13505 466 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 PI16Q6UXB8 463 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 USP27XA6NNY8 438 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 POLR2DO15514 142 aaKnown RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 CYP27B1O15528 508 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 CHMP2AO43633 222 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 PPFIA4O75335 1185 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 UBXN1Q04323 297 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 SRGAP1Q7Z6B7 1085 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 BCAS4Q8TDM0 211 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 STAP2Q9UGK3 403 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 FAM13AO94988 1023 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 IL6STP40189 918 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-213ENST00000514442 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 CABS1Q96KC9 395 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
TCOF1-213ENST00000514442 TXKP42681 527 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 ARID5BQ14865 1188 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 TTC38Q5R3I4 469 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 CFAP58Q5T655 872 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 OSBPL3Q9H4L5 887 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 HEG1Q9ULI3 1381 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-213ENST00000514442 MAST3O60307 1309 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 PRKG1Q13976 671 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 QTRT2Q9H974 415 aaKnown RBP14.66□□□□□ -0.06
TCOF1-213ENST00000514442 CTNND2Q9UQB3 1225 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 SCNN1DP51172 638 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 MRPL12P52815 198 aaKnown RBP14.66□□□□□ -0.06
TCOF1-213ENST00000514442 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
TCOF1-213ENST00000514442 CCT6AP40227 531 aaKnown RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 CCDC144BQ3MJ40 725 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 PLEKHA4Q9H4M7 779 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ZCCHC17Q9NP64 241 aaKnown RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 TRIM37O94972 964 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 KRT13P13646 458 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ADD1P35611 737 aaKnown RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 VAV2P52735 878 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ZNF654Q8IZM8 581 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 MPHOSPH6Q99547 160 aaKnown RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 JPH2Q9BR39 696 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-213ENST00000514442 CCDC113Q9H0I3 377 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 ADGRB3O60242 1522 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 SPATA31A3Q5VYP0 1347 aa14.65□□□□□ -0.06
TCOF1-213ENST00000514442 SLC1A4P43007 532 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms