RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-209ENST00000514013 PICALMQ13492 652 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 SHHQ15465 462 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-209ENST00000514013 USP38Q8NB14 1042 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-209ENST00000514013 USP6NLQ92738 828 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 LOC285556D6RIA3 1793 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 ZEB1P37275 1124 aaPredicted RBP11.34□□□□□ -0.59
SH3D19-209ENST00000514013 PHKA1P46020 1223 aa11.34□□□□□ -0.59
SH3D19-209ENST00000514013 ATG9AQ7Z3C6 839 aa11.34□□□□□ -0.59
SH3D19-209ENST00000514013 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
SH3D19-209ENST00000514013 PORCNQ9H237 461 aa11.34□□□□□ -0.59
SH3D19-209ENST00000514013 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
SH3D19-209ENST00000514013 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
SH3D19-209ENST00000514013 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 EYA2O00167 538 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 SLC5A1P13866 664 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 RHBDL3P58872 404 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 JAG1P78504 1218 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 ZNF384Q8TF68 577 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 LPIN2Q92539 896 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 SENP6Q9GZR1 1112 aaPredicted RBP11.33□□□□□ -0.6
SH3D19-209ENST00000514013 MAST2Q6P0Q8 1798 aa11.33□□□□□ -0.6
SH3D19-209ENST00000514013 FOSL2P15408 326 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 ADORA1P30542 326 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 BTDP43251 543 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 Q3C1V9 767 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 MORN1Q5T089 497 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
SH3D19-209ENST00000514013 LTBP2Q14767 1821 aa11.31□□□□□ -0.6
SH3D19-209ENST00000514013 MTMR2Q13614 643 aa11.31□□□□□ -0.6
SH3D19-209ENST00000514013 NCOR1O75376 2440 aa11.31□□□□□ -0.6
SH3D19-209ENST00000514013 CAP2P40123 477 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 RTP1P59025 263 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 HERVK_113P62684 666 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 RASGRF1Q13972 1273 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 APBA2Q99767 749 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 OSBPL5Q9H0X9 879 aaPredicted RBP11.3□□□□□ -0.6
SH3D19-209ENST00000514013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.3□□□□□ -0.68e-15■■■■■ 50.2
SH3D19-209ENST00000514013 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
SH3D19-209ENST00000514013 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
SH3D19-209ENST00000514013 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 TNFRSF10AO00220 468 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-209ENST00000514013 RGS2P41220 211 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 EPHB4P54760 987 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-209ENST00000514013 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
SH3D19-209ENST00000514013 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
SH3D19-209ENST00000514013 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 BADQ92934 168 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 SIL1Q9H173 461 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
SH3D19-209ENST00000514013 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 CNMDO75829 334 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 ITGB8P26012 769 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 PLA2G5P39877 138 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 BACE1P56817 501 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 ERVK-24P63145 666 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 PDE3AQ14432 1141 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
SH3D19-209ENST00000514013 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
SH3D19-209ENST00000514013 EPAS1Q99814 870 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 DNAJC18Q9H819 358 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
SH3D19-209ENST00000514013 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 DDX20Q9UHI6 824 aaKnown RBP11.28□□□□□ -0.6
SH3D19-209ENST00000514013 MYH13Q9UKX3 1938 aa11.28□□□□□ -0.6
SH3D19-209ENST00000514013 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.61
SH3D19-209ENST00000514013 SEMA3EO15041 775 aa11.27□□□□□ -0.61
SH3D19-209ENST00000514013 IGHA2P01877 340 aa11.27□□□□□ -0.61
SH3D19-209ENST00000514013 MAPK4P31152 587 aa11.27□□□□□ -0.61
SH3D19-209ENST00000514013 CYP2C19P33261 490 aa11.27□□□□□ -0.61
SH3D19-209ENST00000514013 MECOMQ03112 1051 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms