RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 LRRFIP2Q9Y608 721 aaKnown RBP9.79□□□□□ -0.84
CLDND1-229ENST00000513988 GAKO14976 1311 aa9.79□□□□□ -0.84
CLDND1-229ENST00000513988 PHIPQ8WWQ0 1821 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 PEX10O60683 326 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 MYOGP15173 224 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 IL9P15248 144 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 CSF2RAP15509 400 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 CYP2C19P33261 490 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-229ENST00000513988 FAAP100Q0VG06 881 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 CNGB1Q14028 1251 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-229ENST00000513988 LRRC41Q15345 812 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 GRIK5Q16478 980 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 APOBEC3HQ6NTF7 200 aaKnown RBP9.78□□□□□ -0.84
CLDND1-229ENST00000513988 ASCL5Q7RTU5 278 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 CCDC84Q86UT8 332 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-229ENST00000513988 TMEM199Q8N511 208 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 TRPV1Q8NER1 839 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
CLDND1-229ENST00000513988 DOCK1Q14185 1865 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 CYBAP13498 195 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 HMGCS2P54868 508 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 PKN1Q16512 942 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 LEXMQ3ZCV2 418 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
CLDND1-229ENST00000513988 DGLUCYQ7Z3D6 616 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
CLDND1-229ENST00000513988 PORCNQ9H237 461 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 UBE2ZQ9H832 354 aaPredicted RBP9.77□□□□□ -0.85
CLDND1-229ENST00000513988 CERS4Q9HA82 394 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.77□□□□□ -0.85
CLDND1-229ENST00000513988 PHF24Q9UPV7 400 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 LOC285556D6RIA3 1793 aa9.77□□□□□ -0.85
CLDND1-229ENST00000513988 MAP1BP46821 2468 aaKnown RBP9.77□□□□□ -0.85
CLDND1-229ENST00000513988 MYO15AQ9UKN7 3530 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 TECTAO75443 2155 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 SNPHO15079 494 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 CTNND1O60716 968 aaKnown RBP9.76□□□□□ -0.85
CLDND1-229ENST00000513988 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
CLDND1-229ENST00000513988 ANKRD33Q7Z3H0 272 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 TOX2Q96NM4 488 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 TMEM121BQ9BXQ6 578 aaPredicted RBP9.76□□□□□ -0.85
CLDND1-229ENST00000513988 UPF3BQ9BZI7 483 aaKnown RBP9.76□□□□□ -0.85
CLDND1-229ENST00000513988 BABAM1Q9NWV8 329 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 FAM208BQ5VWN6 2430 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 PLXNA3P51805 1871 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 ZNF536O15090 1300 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 MAST3O60307 1309 aa9.76□□□□□ -0.85
CLDND1-229ENST00000513988 DMXL1Q9Y485 3027 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 COL4A6Q14031 1691 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 EPOPA6NHQ4 379 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 PROB1E7EW31 1015 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 SEPT4O43236 478 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 FGBP02675 491 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 KCNA5P22460 613 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
CLDND1-229ENST00000513988 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 ERVK-24P63145 666 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 SPP2Q13103 211 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
CLDND1-229ENST00000513988 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 BMP8AQ7Z5Y6 402 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.75□□□□□ -0.85
CLDND1-229ENST00000513988 TBC1D22AQ8WUA7 517 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 ARNTL2Q8WYA1 636 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 MRIQ9BWK5 157 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 IL23AQ9NPF7 189 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 TBX21Q9UL17 535 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 GPR179Q6PRD1 2367 aa9.75□□□□□ -0.85
CLDND1-229ENST00000513988 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 A0A1W2PQ45 241 aaPredicted RBP9.74□□□□□ -0.85
CLDND1-229ENST00000513988 A0A1W2PQY0 241 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 STK25O00506 426 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 GYG1P46976 350 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 HERVK_113P62684 666 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 NFIAQ12857 509 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 ST3GAL2Q16842 350 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 PUS10Q3MIT2 529 aaKnown RBP9.74□□□□□ -0.85
CLDND1-229ENST00000513988 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 HHIPL2Q6UWX4 724 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 PAGR1Q9BTK6 254 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 DOCK2Q92608 1830 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 UNC79Q9P2D8 2635 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 ZNF292O60281 2723 aa9.74□□□□□ -0.85
CLDND1-229ENST00000513988 VPS13AQ96RL7 3174 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 USP24Q9UPU5 2620 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-229ENST00000513988 SLC15A5A6NIM6 579 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 PLIN1O60240 522 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 CA3P07451 260 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 GRB10Q13322 594 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms