RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 MCM10Q7L590 875 aa8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 TMC4Q7Z404 712 aa8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 OR13H1Q8NG92 308 aa8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 ZNF526Q8TF50 670 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 NXF1Q9UBU9 619 aaKnown RBP8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P17-201ENST00000513734 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 SORBS3O60504 671 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 MAP3K6O95382 1288 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 BMP4P12644 408 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 VAMP1P23763 118 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 TM4SF1P30408 202 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 NFIXQ14938 502 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 ZNF790Q6PG37 636 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 CFAP53Q96M91 514 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 NPHS2Q9NP85 383 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 VTI1BQ9UEU0 232 aa8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.06
HMGN1P17-201ENST00000513734 C2CD2LO14523 706 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 A1BGP04217 495 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 TEFQ10587 303 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 TSNAXIP1Q2TAA8 658 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 DHX32Q7L7V1 743 aaKnown RBP8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 GALNT12Q8IXK2 581 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 THUMPD2Q9BTF0 503 aaKnown RBP8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 NARFQ9UHQ1 456 aa8.45□□□□□ -1.06
HMGN1P17-201ENST00000513734 GADD45BO75293 160 aaPredicted RBP8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 MX2P20592 715 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 EIF5P55010 431 aaKnown RBP8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 C1QTNF8P60827 252 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 PLAURQ03405 335 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 SYT9Q86SS6 491 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 BACH2Q9BYV9 841 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
HMGN1P17-201ENST00000513734 LAMB2P55268 1798 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 ANKRD36CQ5JPF3 1778 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 TAF1P21675 1872 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 RECKO95980 971 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 EDN3P14138 238 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 TGFB2P61812 414 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 TBC1D8BQ0IIM8 1120 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 HYAL2Q12891 473 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 ZNF787Q6DD87 383 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 PLEKHF1Q96S99 279 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 SALL4Q9UJQ4 1053 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 NUDCQ9Y266 331 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 AK5Q9Y6K8 562 aa8.43□□□□□ -1.06
HMGN1P17-201ENST00000513734 H3BM21 787 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 EIF4BP23588 611 aaKnown RBP8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 SOX18P35713 384 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 PRELPP51888 382 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 PCBP4P57723 403 aaKnown RBP8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 MLLT1Q03111 559 aaPredicted RBP8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 GAS6Q14393 721 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 ZNF468Q5VIY5 522 aaPredicted RBP8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
HMGN1P17-201ENST00000513734 A0A1W2PP55 124 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 CAMTA2O94983 1202 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 STARD3NLO95772 234 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 SERPINB2P05120 415 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 NRLP54845 237 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 RASSF7Q02833 373 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 DDX10Q13206 875 aaKnown RBP8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 OSBPL7Q9BZF2 842 aa8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 UBE2OQ9C0C9 1292 aaKnown RBP8.41□□□□□ -1.06
HMGN1P17-201ENST00000513734 ZBTB42B2RXF5 422 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 GIPC1O14908 333 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 ACPPP15309 386 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 NXPE4Q6UWF7 544 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 BCO2Q9BYV7 579 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 EHD4Q9H223 541 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 C12orf49Q9H741 205 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 DNAJB12Q9NXW2 375 aaKnown RBP8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
HMGN1P17-201ENST00000513734 WDR90Q96KV7 1748 aa8.4□□□□□ -1.07
HMGN1P17-201ENST00000513734 J3QW42 95 aa8.39□□□□□ -1.07
HMGN1P17-201ENST00000513734 SIN3BO75182 1162 aa8.39□□□□□ -1.07
HMGN1P17-201ENST00000513734 KIF4AO95239 1232 aa8.39□□□□□ -1.07
HMGN1P17-201ENST00000513734 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms