RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
PDPN-210ENST00000513143 ERICH2A1L162 156 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 SH2B2O14492 632 aaPredicted RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 GH2P01242 217 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 ASNSP08243 561 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 INPP5BP32019 993 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 LIFRP42702 1097 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 IREB2P48200 963 aaKnown RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 AK2P54819 239 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 ANKRD1Q15327 319 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 RCSD1Q6JBY9 416 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 DGKHQ86XP1 1220 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 ENAHQ8N8S7 591 aaPredicted RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 ANKS1AQ92625 1134 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 CEP95Q96GE4 821 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 MTMR4Q9NYA4 1195 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 ZBTB21Q9ULJ3 1066 aa14.73□□□□□ -0.05
PDPN-210ENST00000513143 ANGEL1Q9UNK9 670 aaKnown RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 RBM19Q9Y4C8 960 aaKnown RBP14.73□□□□□ -0.05
PDPN-210ENST00000513143 TOMM70O94826 608 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 FGD1P98174 961 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 PRKG1Q13976 671 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 WTAPQ15007 396 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 SEPT2Q15019 361 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 NOL9Q5SY16 702 aaKnown RBP14.72□□□□□ -0.05
PDPN-210ENST00000513143 SGMS1Q86VZ5 419 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 TMTC2Q8N394 836 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 SMC1BQ8NDV3 1235 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 RBM46Q8TBY0 533 aaKnown RBP14.72□□□□□ -0.05
PDPN-210ENST00000513143 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 LY9Q9HBG7 655 aa14.72□□□□□ -0.05
PDPN-210ENST00000513143 CD2BP2O95400 341 aaKnown RBP14.71□□□□□ -0.05
PDPN-210ENST00000513143 MCM2P49736 904 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 EVCP57679 992 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 FKBP1BP68106 108 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 MAP3K9P80192 1104 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 IFIT1BQ5T764 474 aaKnown RBP14.71□□□□□ -0.05
PDPN-210ENST00000513143 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.71□□□□□ -0.05
PDPN-210ENST00000513143 ARMC9Q7Z3E5 817 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 BRF1Q92994 677 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 ZKSCAN4Q969J2 545 aaPredicted RBP14.71□□□□□ -0.05
PDPN-210ENST00000513143 SNX21Q969T3 373 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 SENP2Q9HC62 589 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 NYAP2Q9P242 653 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 PHIPQ8WWQ0 1821 aa14.71□□□□□ -0.05
PDPN-210ENST00000513143 PASKQ96RG2 1323 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 UNCXA6NJT0 531 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 CELF2O95319 508 aaKnown RBP14.7□□□□□ -0.06
PDPN-210ENST00000513143 TTLL1O95922 423 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 ICA1Q05084 483 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
PDPN-210ENST00000513143 RAB3GAP1Q15042 981 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 LDLRAD1Q5T700 205 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 MOB2Q70IA6 237 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 SIAH1Q8IUQ4 282 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 MKL1Q969V6 931 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 STX8Q9UNK0 236 aa14.7□□□□□ -0.06
PDPN-210ENST00000513143 TOP1P11387 765 aaKnown RBP14.69□□□□□ -0.06
PDPN-210ENST00000513143 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
PDPN-210ENST00000513143 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 VGLL4Q14135 290 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 CST9Q5W186 159 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 CLEC10AQ8IUN9 316 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 GBA2Q9HCG7 927 aaPredicted RBP14.69□□□□□ -0.06
PDPN-210ENST00000513143 PICK1Q9NRD5 415 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.69□□□□□ -0.06
PDPN-210ENST00000513143 CLIP2Q9UDT6 1046 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 LIMCH1Q9UPQ0 1083 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 CSADQ9Y600 493 aa14.69□□□□□ -0.06
PDPN-210ENST00000513143 CCDC69A6NI79 296 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 USP17L5A8MUK1 530 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 PTPRAP18433 802 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 FSTL1Q12841 308 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 NFXL1Q6ZNB6 911 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 C2orf69Q8N8R5 385 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 ZNF274Q96GC6 653 aaPredicted RBP14.68□□□□□ -0.06
PDPN-210ENST00000513143 LARP6Q9BRS8 491 aaKnown RBP14.68□□□□□ -0.06
PDPN-210ENST00000513143 KAT14Q9H8E8 782 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 SYNPO2Q9UMS6 1093 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 SNCAIPQ9Y6H5 919 aa14.68□□□□□ -0.06
PDPN-210ENST00000513143 KLF18A0A0U1RQI7 1052 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 UBE2Q2LH0YL09 131 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 APOA5Q6Q788 366 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
PDPN-210ENST00000513143 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
PDPN-210ENST00000513143 WDR18Q9BV38 432 aa14.67□□□□□ -0.06
PDPN-210ENST00000513143 TBC1D2Q9BYX2 928 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms