RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 DNAJC18Q9H819 358 aa17.66■□□□□ 0.42
LETM1-207ENST00000512669 TXNRD2Q9NNW7 524 aa17.66■□□□□ 0.42
LETM1-207ENST00000512669 MAGEA10P43363 369 aaPredicted RBP17.65■□□□□ 0.42
LETM1-207ENST00000512669 GPR142Q7Z601 462 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 PLEKHH3Q7Z736 793 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 MAGEB6Q8N7X4 407 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 USP6NLQ92738 828 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
LETM1-207ENST00000512669 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
LETM1-207ENST00000512669 RBPJLQ9UBG7 517 aa17.65■□□□□ 0.42
LETM1-207ENST00000512669 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
LETM1-207ENST00000512669 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
LETM1-207ENST00000512669 COL6A1P12109 1028 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 USP14P54578 494 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 JAG1P78504 1218 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 CACNB2Q08289 660 aaPredicted RBP17.64■□□□□ 0.41
LETM1-207ENST00000512669 DEFB123Q8N688 67 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
LETM1-207ENST00000512669 C12orf42Q96LP6 360 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 UBE2OQ9C0C9 1292 aaKnown RBP17.64■□□□□ 0.41
LETM1-207ENST00000512669 PALD1Q9ULE6 856 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 PFASO15067 1338 aa17.64■□□□□ 0.41
LETM1-207ENST00000512669 GDF11O95390 407 aa17.63■□□□□ 0.41
LETM1-207ENST00000512669 SYN1P17600 705 aa17.63■□□□□ 0.41
LETM1-207ENST00000512669 MORN1Q5T089 497 aa17.63■□□□□ 0.41
LETM1-207ENST00000512669 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
LETM1-207ENST00000512669 CUL9Q8IWT3 2517 aa17.63■□□□□ 0.41
LETM1-207ENST00000512669 USP17L15C9J2P7 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L13C9JLJ4 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L11C9JVI0 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L18D6R9N7 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L22D6RA61 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L17D6RBQ6 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L19D6RCP7 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L20D6RJB6 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 MSCO60682 206 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 USP17L24Q0WX57 530 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 SHROOM1Q2M3G4 852 aaPredicted RBP17.62■□□□□ 0.41
LETM1-207ENST00000512669 SLFNL1Q499Z3 407 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 FEZ1Q99689 392 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 RIOK1Q9BRS2 568 aaKnown RBP17.62■□□□□ 0.41
LETM1-207ENST00000512669 EHD4Q9H223 541 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 PORCNQ9H237 461 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
LETM1-207ENST00000512669 STXBP5LQ9Y2K9 1186 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 PCDHB15Q9Y5E8 787 aa17.62■□□□□ 0.41
LETM1-207ENST00000512669 COL6A3P12111 3177 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 MYH1P12882 1939 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 TCRBV5S4A2TA0A5A2 114 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 GOLIM4O00461 696 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 PDE6AP16499 860 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 ATP5JP18859 108 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
LETM1-207ENST00000512669 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 MFSD14CQ5VZR4 134 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 LHX8Q68G74 356 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
LETM1-207ENST00000512669 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
LETM1-207ENST00000512669 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 EMILIN3Q9NT22 766 aa17.61■□□□□ 0.41
LETM1-207ENST00000512669 SLC15A5A6NIM6 579 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 GH2P01242 217 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 CHGBP05060 677 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 Q3C1V9 767 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 LBX2Q6XYB7 198 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 LRRCC1Q9C099 1032 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
LETM1-207ENST00000512669 FRMPD3Q5JV73 1810 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 CCND3P30281 292 aaPredicted RBP17.59■□□□□ 0.41
LETM1-207ENST00000512669 USP5P45974 858 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
LETM1-207ENST00000512669 SLC9C2Q5TAH2 1124 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 HAUS7Q99871 368 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 IVNS1ABPQ9Y6Y0 642 aa17.59■□□□□ 0.41
LETM1-207ENST00000512669 ZNF532Q9HCE3 1301 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 PEX10O60683 326 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 HOXC6P09630 235 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 EVX2Q03828 476 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 CCL14Q16627 93 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 CATSPERGQ6ZRH7 1159 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 CABP5Q9NP86 173 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 MTMR10Q9NXD2 777 aa17.58■□□□□ 0.4
LETM1-207ENST00000512669 VCAM1P19320 739 aa17.57■□□□□ 0.4
LETM1-207ENST00000512669 PTPREP23469 700 aa17.57■□□□□ 0.4
LETM1-207ENST00000512669 RAB3GAP1Q15042 981 aa17.57■□□□□ 0.4
LETM1-207ENST00000512669 LRRC26Q2I0M4 334 aa17.57■□□□□ 0.4
LETM1-207ENST00000512669 CERKLQ49MI3 558 aaPredicted RBP17.57■□□□□ 0.4
LETM1-207ENST00000512669 LBHD1Q9BQE6 289 aaPredicted RBP17.57■□□□□ 0.4
LETM1-207ENST00000512669 DDX20Q9UHI6 824 aaKnown RBP17.57■□□□□ 0.4
LETM1-207ENST00000512669 MAGEB6P1A0A0J9YX57 407 aa17.56■□□□□ 0.4
LETM1-207ENST00000512669 CNMDO75829 334 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms