RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 RNF40O75150 1001 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 RASSF9O75901 435 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 ECM2O94769 699 aaPredicted RBP10.03□□□□□ -0.8
LINC01258-201ENST00000512517 PYGLP06737 847 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 SYT1P21579 422 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 PDE1AP54750 535 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 RASA3Q14644 834 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 CCDC57Q2TAC2 916 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 SUSD4Q5VX71 490 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 CWF19L1Q69YN2 538 aaKnown RBP10.03□□□□□ -0.8
LINC01258-201ENST00000512517 MYLK4Q86YV6 388 aaPredicted RBP10.03□□□□□ -0.8
LINC01258-201ENST00000512517 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 FAM81AQ8TBF8 368 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 ZNF594Q96JF6 807 aaPredicted RBP10.03□□□□□ -0.8
LINC01258-201ENST00000512517 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
LINC01258-201ENST00000512517 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
LINC01258-201ENST00000512517 ERICH2A1L162 156 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 MYO1FO00160 1098 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 N4BP1O75113 896 aaKnown RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 APBA3O96018 575 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 IFIT2P09913 472 aaKnown RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 PYGBP11216 843 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 RFC4P35249 363 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 IFFO1Q0D2I5 559 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 SNX1Q13596 522 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 CASP8Q14790 479 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC178Q5BJE1 867 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 CAPRIN2Q6IMN6 1127 aaKnown RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 SLC30A9Q6PML9 568 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 AACSQ86V21 672 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 AMIGO3Q86WK7 504 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 B4GALNT2Q8NHY0 566 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 VCPKMTQ9H867 229 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 C4AP0C0L4 1744 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 SH3TC1Q8TE82 1336 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 OPA1O60313 960 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 SASH1O94885 1247 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 RFX5P48382 616 aaPredicted RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.81
LINC01258-201ENST00000512517 STX1AQ16623 288 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC40Q4G0X9 1142 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 PARP10Q53GL7 1025 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC170Q8IYT3 715 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 DNAJC25Q9H1X3 360 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 COPRSQ9NQ92 184 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.81
LINC01258-201ENST00000512517 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 CDHR2Q9BYE9 1310 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 GOLGA6L7A0A1B0GV03 622 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 GOLGA6L10A6NI86 522 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 PRPF6O94906 941 aaKnown RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 OATP04181 439 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 FERP16591 822 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 TPP2P29144 1249 aaPredicted RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 PEX19P40855 299 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 KRT85P78386 507 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 IFIT5Q13325 482 aaKnown RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 MYBPC2Q14324 1141 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 KCNB1Q14721 858 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 DBN1Q16643 649 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 MYSM1Q5VVJ2 828 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 ARHGAP22Q7Z5H3 698 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 APLFQ8IW19 511 aaPredicted RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 SUN2Q9UH99 717 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 NARFQ9UHQ1 456 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 GGA2Q9UJY4 613 aa10.01□□□□□ -0.81
LINC01258-201ENST00000512517 CORO1CQ9ULV4 474 aaPredicted RBP10.01□□□□□ -0.81
LINC01258-201ENST00000512517 BECN2A8MW95 431 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 SDSP20132 328 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 CTSWP56202 376 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 PPFIA1Q13136 1202 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 TXNRD1Q16881 649 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC38Q502W7 563 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 TBC1D9BQ66K14 1250 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 CLEC4GQ6UXB4 293 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 NUP133Q8WUM0 1156 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 ZFAND2BQ8WV99 257 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
LINC01258-201ENST00000512517 EPC1Q9H2F5 836 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10□□□□□ -0.81
LINC01258-201ENST00000512517 SPEF2Q9C093 1822 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
LINC01258-201ENST00000512517 GOLGA6CA6NDK9 693 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 GOLGA6BA6NDN3 693 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 PDE8AO60658 829 aa10□□□□□ -0.81
LINC01258-201ENST00000512517 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
LINC01258-201ENST00000512517 MAP4K4O95819 1239 aaPredicted RBP10□□□□□ -0.81
LINC01258-201ENST00000512517 GOLGA6DP0CG33 693 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms