RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RRP12Q5JTH9 1297 aaKnown RBP15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 AMOTL1Q8IY63 956 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 EYA3Q99504 573 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 TOMM22Q9NS69 142 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 MYH15Q9Y2K3 1946 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 GPR75-ASB3A0A0A6YYF3 556 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 NTRK3Q16288 839 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 RTN1Q16799 776 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 GAS2L3Q86XJ1 694 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 LEO1Q8WVC0 666 aaPredicted RBP15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
DEPDC1B-206ENST00000512452 GAKO14976 1311 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 KIAA0100Q14667 2235 aaKnown RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 DDAH1O94760 285 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 SLC10A3P09131 477 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 OLFM4Q6UX06 510 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 ZNF654Q8IZM8 581 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 ZSCAN10Q96SZ4 725 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1B-206ENST00000512452 TNKSO95271 1327 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 GOLGA6L4A6NEF3 574 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 GPR25O00155 361 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 ADD1P35611 737 aaKnown RBP15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 USP5P45974 858 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 SSRP1Q08945 709 aaKnown RBP15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 TRIM22Q8IYM9 498 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 C2orf69Q8N8R5 385 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 ALG1Q9BT22 464 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 GBA2Q9HCG7 927 aaPredicted RBP15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 RBM28Q9NW13 759 aaKnown RBP15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 GPRC5DQ9NZD1 345 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 CEP290O15078 2479 aa15.22■□□□□ 0.03
DEPDC1B-206ENST00000512452 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 DTNBO60941 627 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 CDC27P30260 824 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 FKBP1AP62942 108 aaKnown RBP15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 TRIM29Q14134 588 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 MFSD14BQ5SR56 506 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 CATIPQ7Z7H3 387 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 FANCBQ8NB91 859 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 DDX19AQ9NUU7 478 aaKnown RBP15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.03
DEPDC1B-206ENST00000512452 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 SYCE3A1L190 88 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 RANBP6O60518 1105 aaKnown RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 YEATS4O95619 227 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 ENAHQ8N8S7 591 aaPredicted RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 SH3RF3Q8TEJ3 882 aaPredicted RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 ANKS1AQ92625 1134 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 MAP3K14Q99558 947 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 MCM9Q9NXL9 1143 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 RBBP6Q7Z6E9 1792 aaKnown RBP15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
DEPDC1B-206ENST00000512452 DEXIO95424 95 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 PLA2G5P39877 138 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 BTDP43251 543 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 PODNQ7Z5L7 613 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 TSPY26PQ9H489 355 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 POLR3EQ9NVU0 708 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 TFIP11Q9UBB9 837 aaKnown RBP15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 STXBP5LQ9Y2K9 1186 aa15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 DDX60LQ5H9U9 1706 aaKnown RBP15.19■□□□□ 0.02
DEPDC1B-206ENST00000512452 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 SOX1O00570 391 aaPredicted RBP15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 FKTNO75072 461 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 NASPP49321 788 aaPredicted RBP15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 GRIK5Q16478 980 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 KRT40Q6A162 431 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 DLK2Q6UY11 383 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 DGKHQ86XP1 1220 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms